| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1677 |
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| Symbol | |
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| ID | 8132619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1935634 |
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| End bp | 1937466 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644864965 |
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| Product | glycosyl transferase family 8 |
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| Protein accession | YP_003017254 |
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| Protein GI | 253688064 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1442] Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCAAA AAGACCAAGA TTTACTTATT CCACACGATA GTTTATTACC ACATCCCCCA
GAACATATTA GAATAGAACC AACTATTCAC CCTGTAAAAG AATTTTATTC CATTACACAA
CCAACTCAGG ATATTCACTC GGAAGTATTT AAAACATTGC TCAATAGACA TGATGCAAAG
GAAGTGATTG AAATAATACG GCAGAGAATG CCAGAACTGA CTTTAGCTCA TGTGTCAGCC
CACTATTTAC AACTCTGCCT GATGTACGGT GCCGATCGCG GTGTGGCCAA CCTGTTTCAA
AAGATCAGAA TGCGCTACAA CCGAAGCACT CATCATAATC TTGTTAATGT CGCAACACGT
TTGATTAACA ACAGTTTCAT GAACGAGGCT AATACGATTA TTTTGCACTT ATCAGAGTTC
GCTAGTCGGC ATCCAGCTCA ACGTATTTTG CGCTTAAAAT ACCTGTTTGC CCTCGAACAA
CTTGATGAGC TGAGCGAGAT GTTTAAAGAC ATCCCATTAA GGGATTACCA AACCTCGGAC
GAACTGATTG CACTTCGAGT CAAATATGAC TGTGTCATGG GGAACCCATC TGCTGGCCTG
GAATGGTTAA TCGCATTAGC ACCTCTCGAC ACACTTCCTC CCCGCTTACT CCAGTGGGCG
GTGGACTGCA TGACGACACT AGAACGGTAC GAGGAGGCGG TCCCCTTACT GGAGGCGTGG
TTTAGCCTTG ATTTCTCTTA TCGGAGAGAT ACCAAGCGCG TACTGCGGGT GGCAGAAAAA
ACGGGGGAAA CCCCCAGATT GGTGCTGGCT ATCGAACGCC TCCATGGCTG GTTTACCTGC
CCTGATTTGG TCCGCTTACG CACGACGCTG CTTCAGGCTT ATTCCCCTCC ACACCCCGTT
CAAATTAGCG GGACCTCTAC AACAGTCAAC GGCCCGACAT GCGGAGATGC CGCGCTACAG
CCAACGAAGC CTCTCTCTGA ATATGCCATA TTTTTCTGTA CTGACGCCGA CTTTAGTCTC
CCAGCCGTTG TGGCATTAAC ATCGCTGGCG ATGTCGATAG GTGGTGCCAA TAATCTCCCC
GACATCTATA TTTTTGTTCC GCCTGAAATT CGCCCGCTTT GGGAACGTAT TGCCGAGCGA
TTCACGTCAG CATTTCCAAT TATAACGCTA CGAATTGTTT CGACCTTACA GATGGATCTG
GATGAAGTCC GTGCGCAATT TGGTTTCTAT AACGTCGGTG AGACATTGAG CACAACCACC
TACACGCGAT TCTACGCGAG CCGCTATTTA CACTATATCG GCGTGACCCG TGCGCTTTAT
CTCGACTCTG ATATTGTGAT CCTGCATTCG CCCTTATCCC TGCTCTATGA GGATATGCAG
GGGTTCCCAT TGGCTGCGCG TACTGACCGA AATACTCCGT TGATAAAGCG CGCTATCCGG
CTACATCAGA TCGCCAATGA ACGTTATTTT AATGCTGGAG TGATACTGTT TGATCTGACA
CATCCCGCCA TGATCTCTAC CATCAACACT GCAATTACGT ATAGCAAACA AGGAAATAGC
CCGTTACTTT TTCTCGATCA ATGCGCGTTG AATAAAGCCA TTTCCGGGCT TTATCTGGCA
CTGGATGAGC GCTACAACAG GTTCATACCA CCAAGTAGCG CTACACAAGT GATAGAGGAC
AACACCGTCA TTATGCACTT CATTGAAACC CCTAAGCCCT GGCAAGCGGG CTACGCTGGC
CAGGGACTCA CGATATGGGG TGAATACCAA CGCCACGCAA TACGCATAAT CGGCGATGAA
ATTTTTTGTT CTAGCCCGGT TTGTCCCTCA TGA
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| Protein sequence | MDQKDQDLLI PHDSLLPHPP EHIRIEPTIH PVKEFYSITQ PTQDIHSEVF KTLLNRHDAK
EVIEIIRQRM PELTLAHVSA HYLQLCLMYG ADRGVANLFQ KIRMRYNRST HHNLVNVATR
LINNSFMNEA NTIILHLSEF ASRHPAQRIL RLKYLFALEQ LDELSEMFKD IPLRDYQTSD
ELIALRVKYD CVMGNPSAGL EWLIALAPLD TLPPRLLQWA VDCMTTLERY EEAVPLLEAW
FSLDFSYRRD TKRVLRVAEK TGETPRLVLA IERLHGWFTC PDLVRLRTTL LQAYSPPHPV
QISGTSTTVN GPTCGDAALQ PTKPLSEYAI FFCTDADFSL PAVVALTSLA MSIGGANNLP
DIYIFVPPEI RPLWERIAER FTSAFPIITL RIVSTLQMDL DEVRAQFGFY NVGETLSTTT
YTRFYASRYL HYIGVTRALY LDSDIVILHS PLSLLYEDMQ GFPLAARTDR NTPLIKRAIR
LHQIANERYF NAGVILFDLT HPAMISTINT AITYSKQGNS PLLFLDQCAL NKAISGLYLA
LDERYNRFIP PSSATQVIED NTVIMHFIET PKPWQAGYAG QGLTIWGEYQ RHAIRIIGDE
IFCSSPVCPS
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