| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1676 |
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| Symbol | |
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| ID | 8132618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1933585 |
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| End bp | 1935432 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644864964 |
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| Product | glycosyl transferase family 8 |
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| Protein accession | YP_003017253 |
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| Protein GI | 253688063 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1442] Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGCAC AAGAAAAGGA TTTTGTTTCC TCACATCATA CCGGAGGGCC CGTTGTACCG
CCCTTTGTTT CAGATCATTT ACCGGCTAAC CGAATGGCCG GGCCTACGGC TAGCAGTGCC
ATAACCGATG CCTATTTCGG TACTGAGATA GGCAGAATAT TACTTAATCT GCACGACGCC
AGCATCGCGT TTGCTGCGCT GCAACAGAAT AATGCAGGTG TTTCTCAGGT TACGTTGACA
ACCGGTTACC TACAACTATG CCTCCGTTAT GGTGCCGATC AAGGTGTCGC CCGCTTGCTA
AAGAGCGTGC AAATGGCATA CGTGCATAGC TGTTATCACG CGCTGATCGG TGTCGCAACT
CGTCTCATTA ATGCAGGTCT GATGTCCGAC GCCGAATCGG TCATTGCACA CTTATGTAAG
TTCACGGGGC CGACTGCAGA GATTAGGATT CTCCGTTTAA AATTCCTGTT TAAGGCTGCA
CAGTTCGACG AGTTGCACAA ACAATTTGCC CATATTCCGT TACGGGATTA TCGGATCAAT
GCGGAACTTC TTATGCTGCG TGTTCGATAC GAGTGTATTA CAGGAAGACC CGATGCCGGG
CTCACATGGC TGGACGAGTT CGGCCCTCGC AACACGCTAC CTGTCGATCT CATGTGGTCA
GCGGCACAAT GTCTGAACGA ACTCGGCAAA TTTGAAGATG CCTTAGCTTT ACTTGAGGTG
TGGATCAGCC TCGATTTCTC TTTTAAGGAT CACGCCGAAC TGGTGCTGAA TACCGCGTCA
AAAAGCAGTG GCACCTTGAG GCTCGTGCGG GCTATCGAGG CATTACATGG CTGGTTCACT
TCGCTCGACC TGTTACACCT GCGTACCGCA TTACTCCAAA CAATTGAAGC ACGCCATTCT
GCTCATGCAA AAGTGACTTC TGTTGATGAA AAGCAGAGCA TCAGAGAGCT CGACTTCCCC
TACGCCAACG GCATGATATC CATGACGACC CTAAGGCAAA GACACGCTAT TTTCTTATGT
GCTGATACAG CATATAACGT TCCAGCGCTG GTAGCGCTAA CCTCGTTGGC AATGTCGATT
GCACAGGCTA ATCCTCCCCC CGACATTTAT ATGTTTGTTC TGCCTGAAAC GCATGAAATC
TGGAGCCAGA TCGCACATTG TTTTGCCAAA AAATTTCCTC TGACAGTAAA AATTGTATCG
ACATTACAGA TGGATCTCGA TGAAAGCCGA GCGCACTACG GGTTTCAAAA CTACGGCAAA
ATGCTGAGCA TCACCGCGTA CGCCCGGCTT TACGCAAGCC GCTATTTGCA AGGACTTGGT
ATTACACGCG CACTGTATTT AGACTCCGAT GTTGTTATCC GCCGTTCACC ACTTGGTTTG
CTACATATGG ACATGGGAGG GTATCCCCTC GCAGCACGTA CTGAACGTGC ACACCCAAGA
ATCAGCCGCG CGATTAAGCT GCACGGTATT CCCAACGGCC GCTATTTTAA CTCTGGTATT
TTGCTGCTTG ATTTCCAGCA TCCGGCAACG CAATCAACGC TAAATACGGC CATCGCTTAT
AGCGAGCAAC TCGACAACAA GCTGCTCTAT CTAGATCAAT GTGCGCTGAA CAAATCCATT
CAGGGGCTGT ATCTGGATTT GGATGAAAAA TTTAACTGGT TCATTGTTCC TGACGATACT
GCCCATCCTC AAGACGAGGA TGCCGCGATC ATGCATTTTA TCAGCACGCC GAAACCCTGG
GATCTTAACT ACAGCGGGAG AGGAGCAACA CTTTGGGCCG ACTACAAACA TCATGCAATA
CAGGTGATCG GCGAGGGTAT TTTTTACGCC ATAAGCAAGG TGGCATGA
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| Protein sequence | MAAQEKDFVS SHHTGGPVVP PFVSDHLPAN RMAGPTASSA ITDAYFGTEI GRILLNLHDA
SIAFAALQQN NAGVSQVTLT TGYLQLCLRY GADQGVARLL KSVQMAYVHS CYHALIGVAT
RLINAGLMSD AESVIAHLCK FTGPTAEIRI LRLKFLFKAA QFDELHKQFA HIPLRDYRIN
AELLMLRVRY ECITGRPDAG LTWLDEFGPR NTLPVDLMWS AAQCLNELGK FEDALALLEV
WISLDFSFKD HAELVLNTAS KSSGTLRLVR AIEALHGWFT SLDLLHLRTA LLQTIEARHS
AHAKVTSVDE KQSIRELDFP YANGMISMTT LRQRHAIFLC ADTAYNVPAL VALTSLAMSI
AQANPPPDIY MFVLPETHEI WSQIAHCFAK KFPLTVKIVS TLQMDLDESR AHYGFQNYGK
MLSITAYARL YASRYLQGLG ITRALYLDSD VVIRRSPLGL LHMDMGGYPL AARTERAHPR
ISRAIKLHGI PNGRYFNSGI LLLDFQHPAT QSTLNTAIAY SEQLDNKLLY LDQCALNKSI
QGLYLDLDEK FNWFIVPDDT AHPQDEDAAI MHFISTPKPW DLNYSGRGAT LWADYKHHAI
QVIGEGIFYA ISKVA
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