| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1674 |
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| Symbol | |
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| ID | 8132616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1929720 |
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| End bp | 1931552 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644864962 |
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| Product | ABC transporter related |
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| Protein accession | YP_003017251 |
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| Protein GI | 253688061 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTATC GTCGATTTGA GCAACTGATT ACTATATTTC GCGATGCACC AGCAGATATA
CCACCAAATA GATTACGACC ATTTTATTTT CACTATCTAT ATCAGGTATG GCCAAGCTTC
ACTGCGCTGT TAGTCGTAGG GGGGATTACT GCGCTCATTG ACGTGGTTAT ACTCAGTTAT
TTAGGCCGTA TCATCGATCT CATCCGCATT ACCCCCAGTA ACCACTTCTT CAGTGAACAT
GGTAATGAAC TTCTCTGGAT GGCTGCCCTT ACGCTCATCA TTCAGCCCTT CTTCCTTGGA
TTACGAAATT TACTCACTAA TCAATCAATT AACCCTTGCA TGACAAGCAT GATTCGATGG
CAGCACTACA ATACCGTACT CAAGCAGAGC CTAAATTTCT TTCAAAGTGA TTTTGCCGGA
CGTATCACAC ACCGCATTAT GCAAACAGGG AATGCCTTAC GTGACTCTGT TGTTCAGGCT
GTATCGGCCA TTTGGCATGT GCTGATTTAT GTATTAAGTA CGCTGTTCGT GCTTTCAGAA
ATGGACTGGC GTTTAATGGT AATACTTATT ATCTGGGTGG TGCTATACAT CAGCTGTCTG
CGCTATTTCG TGCCACGGGT GAAAGCACGA TCCATTGAAT CAACAGAGGC TAACTCAAAA
CTCATTGGGC GTATCGTTGA TGGCTATACC AACATTTTCA CTTTGAAGTT GTTTTCTCAC
ACCATGCTTG AAGCACGCTA CGTTAGGGAC GCTATAACAG AACATACGCA TAAAATGCAG
ATGGCCAACC GTATACTCAC CAGTATGGAC CTGACAATCA TCATGCTGAA CAGTCTGCTG
ATCGTCGGTA GTATCGGTTT TGCGCTATGG CTCTGGACGC ACTCGTTACT AAGCGCTGGC
GCAATCGCAA TAGTGACAAG TTTGGTAATT CGTATCACCA ATATGTCAGG GTGGATCATG
TGGGTGGTGA ATAGCATCTT CGAAAGTCTT GGCATCGTAC AAGAAGGCAT GAAGACGATT
TCTCAGCCGA TCAGTATTAC CGATAAATTA AATGCACCAG CCTTGAAGGT ACAACATGGC
ACCATCACTT TTGAGCAGGT TAGTTTTTGT TACAACACCT CACATCACAT CATTGAAGGA
TTAAATTTTT GCATCAGGCC TGGGGAAAAA ATCGGTCTCG TCGGGCCTTC TGGAGCAGGA
AAGTCAACGT TGGTCGGATT GCTTCTTCGC CTTTATGACC TGCAAAGTGG AAGTATCCTC
ATCGATAACC AGAATATTGC CGACGTGACA CAAGAAAGTT TGCGGGACCA AATCGGGATG
ATTACACAAG ATACCTCGCT GCTGCACCGC TCGATACGCG ATAACCTGCT GTACGGTAAA
TACAACGCCA CTGATAAAGA GTTGATGCAA GCGCTGAGGA ATGCACAAGC AGATGAATTC
ATCATGCAAA TCGCCGATTC TCAAGGCCGT TCAGGACTAG ATGCACATGT AGGAGAACGA
GGTATCAAAT TATCGGGAGG CCAGCGTCAA CGTATTGCCA TCGCACGCGT TTTACTGAAA
GACGCCCCTA TTTTGATTAT GGATGAGGCA ACGTCAGCAC TGGACTCGGA AGCCGAGGCC
GCTATTCAGG ATAATCTGGA TATTTTAATG AAGGGAAAAA CCGTTATCGC TATCGCCCAC
CGACTATCGA CCATTGCCAA AATGGATCGT CTGGTGGTAA TGCAACAGGG AAGAATTGTC
GAAGTAGGAA ACCATAGCGA TTTATTGGCA CAAGAGGGGG TATATGCCCG TTTGTGGCGG
CATCAAACGG ATGGGTTCGT CGGGATAAGC TAG
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| Protein sequence | MLYRRFEQLI TIFRDAPADI PPNRLRPFYF HYLYQVWPSF TALLVVGGIT ALIDVVILSY
LGRIIDLIRI TPSNHFFSEH GNELLWMAAL TLIIQPFFLG LRNLLTNQSI NPCMTSMIRW
QHYNTVLKQS LNFFQSDFAG RITHRIMQTG NALRDSVVQA VSAIWHVLIY VLSTLFVLSE
MDWRLMVILI IWVVLYISCL RYFVPRVKAR SIESTEANSK LIGRIVDGYT NIFTLKLFSH
TMLEARYVRD AITEHTHKMQ MANRILTSMD LTIIMLNSLL IVGSIGFALW LWTHSLLSAG
AIAIVTSLVI RITNMSGWIM WVVNSIFESL GIVQEGMKTI SQPISITDKL NAPALKVQHG
TITFEQVSFC YNTSHHIIEG LNFCIRPGEK IGLVGPSGAG KSTLVGLLLR LYDLQSGSIL
IDNQNIADVT QESLRDQIGM ITQDTSLLHR SIRDNLLYGK YNATDKELMQ ALRNAQADEF
IMQIADSQGR SGLDAHVGER GIKLSGGQRQ RIAIARVLLK DAPILIMDEA TSALDSEAEA
AIQDNLDILM KGKTVIAIAH RLSTIAKMDR LVVMQQGRIV EVGNHSDLLA QEGVYARLWR
HQTDGFVGIS
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