| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1662 |
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| Symbol | |
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| ID | 8132604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1915091 |
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| End bp | 1916602 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644864950 |
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| Product | ABC transporter related |
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| Protein accession | YP_003017239 |
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| Protein GI | 253688049 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0101569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCCTA CCGCCCAAAG CCGATTGGAA ATGCAGAACA TTTCCATCTC CTTTTCTGGT
TTCCACGCCC TCAAGCAGGT TAATTTCACA CTGGAAGGTG GTTCGATTCA TGCCCTGACC
GGCGCAAACG GCGCGGGTAA ATCCACGCTC ATGACCATCT TATCCGGCGC TTACGATCAC
TATCAGGGCG ACATTCTAAT TAATGGCAAG CAGGTCGATG TCCATTCACC GCGTGATGCC
AAGCGGTACG GTATTCATCT GGTGCAGCAG GAAGTCGATG TCGCGCTGGT TCCCACGCTG
TCCGTAGCGG AAAACATTAT GCTGGATACG CTGGCGCAGG ACGGGCATCT GCTGAGCTGG
CCGCAGATAT ACCGTCAGGC GCAGGCACTT CTCGATCAAC TTGGCGTTCA CCTGAATGTT
CGTCAGCGAC TGGATACCTG TTCGCTGGCC GAGAAACAGC AAATTCTGCT CGCCCGTGCC
TTGTCCCACG AATGTCGTTT CCTGATTTTA GATGAACCCA CTGCCCCGCT GGATCAGGCC
GAAAGCGCTC GCCTCTTTCA GGTAGTACGC CGTTTGCAGG CGGATGGCAT CGGAATCGTG
TTTATTTCCC ACCGTATTCA TGAGCTGAGC GAAATCTGCG ATACGTTGAC CGTCCTGCGT
GACGGCGAGT TTGTCAGCAG CGGCGCGATG CAGGGGCTCA GTGGCGAAGA GATCGTGGAG
AGAATGCTGG GGCATCGGCT TGACGATATT TTCCCTCCGC GCCGAACCGC ACCTGCTGAA
GAAACGCTGC TTCAGGTCAC CGGTTTGCAC GATGAAACAC TGCTGCACAA TATTTCCCTT
ACGCTGCGCA AAGGGGAAAT TCTGGGCATT GCTGGGCTGG CAGGTGCGGG GAAAACCGAG
CTATGTAAAG CGCTGTTCGG CGCGGAACCC TGCCAAATCG CGCAAGGTGA ATATCGCGGT
AAGCCCTGGC GGCCGCACTC GCCACACCAG TCCGTCGAAC AAGGTTTGGC GCTGGTTCCT
GAAGAGCGGC GTAAAGAAGG CATTTTTATT GATGAATCCG TCACCATGAA TCTCAGCATC
ACCGCCACCG ACAGCTTTTC CCGCTGGGGC GTTTTCAGCC GCAGTAAGGC TGTTAGCTGG
GCGAAACAGG TCGTTGAGCA GCTTGCGGTT CGCACCACCG GTCCGACGCA AAAGCTGGCA
CGTCTGTCAG GCGGGAATCA GCAAAAAGTG GCTATCGGCA AATGGCTACG CAGCGAAGCA
CAAGTTCTTA TTTTTGATGA GCCCACCAAA GGCGTAGATA TCAAGGCCAA GCAGGATCTG
TTCACGTTGA TTGACGGCCT CGCTCGTCAG GGAAAAGGCA TTATTTATGC CTCGGGCGAA
TTTTCCGAAC TTGTCGGACT CTGCGATCGC ATCTGCGTGC TATGGGATGG TCGCATTGTC
GCCGAGCTGA ACGCCGCTGA GATTGACGAA GAAACCTTAC TTTTATATTC AACTGGAGGA
ACTCCCGCGT GA
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| Protein sequence | MIPTAQSRLE MQNISISFSG FHALKQVNFT LEGGSIHALT GANGAGKSTL MTILSGAYDH
YQGDILINGK QVDVHSPRDA KRYGIHLVQQ EVDVALVPTL SVAENIMLDT LAQDGHLLSW
PQIYRQAQAL LDQLGVHLNV RQRLDTCSLA EKQQILLARA LSHECRFLIL DEPTAPLDQA
ESARLFQVVR RLQADGIGIV FISHRIHELS EICDTLTVLR DGEFVSSGAM QGLSGEEIVE
RMLGHRLDDI FPPRRTAPAE ETLLQVTGLH DETLLHNISL TLRKGEILGI AGLAGAGKTE
LCKALFGAEP CQIAQGEYRG KPWRPHSPHQ SVEQGLALVP EERRKEGIFI DESVTMNLSI
TATDSFSRWG VFSRSKAVSW AKQVVEQLAV RTTGPTQKLA RLSGGNQQKV AIGKWLRSEA
QVLIFDEPTK GVDIKAKQDL FTLIDGLARQ GKGIIYASGE FSELVGLCDR ICVLWDGRIV
AELNAAEIDE ETLLLYSTGG TPA
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