| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1661 |
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| Symbol | |
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| ID | 8132603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1914099 |
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| End bp | 1915094 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644864949 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_003017238 |
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| Protein GI | 253688048 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00394287 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTCACC CACTTTCATC TAACGGGGCG CTCCCCTTCC GTCACCACGT TTTCGAGTTT
CTCTATAAGT GGGGCATGTT GATCACGGTT GTCGCGCTGA TTACGCTTTT CGGGCTGGCG
TCGGACAACT TTCTTGACCC GTATAACATC ATCAATATTC TGCGTTCTAT CGCCATCGTC
ACGGTGATTG CGATTGGCGT CTCTATCTCG CTGTCCGTCG GCGGTTTTGA TCTGTCCGTG
GGCTCAACGG CGTCGCTGGC CAATGCACTG GTTATCTCGC TTTTTGTCTG GTACGGATTC
GGCACCACAG GCGCGATCGT TCTGACACTT CTTCTGTGCA CGCTGGTTGG GCTATTCAAC
GCCTTTCTTA TCGTCGTACT GAAGATTCCC GATATGCTCG CAACACTTGC CAGTCTGTTC
GTCATTCAGG GCGTCGCGAT GACGTACAGC TATGGCGGCT CCATCACCCA GAACATGGTA
TTGCCCAGTG GTGAAATGGC GGAAGGCGTT ATTCCTGAGT TCTTTGCCAC ACTGGGTCAG
GTACCGGTCA TTGTGGTCAT CATGCTGGCG GTAACGGTGT TGGTGCAGCT GTATCTGTCC
CTTACCAAAC ACGGTCGCCG GATGTATGCC ATCGGCGGCA ACCCGGAAGC CGCTCGACTT
GCTGGCATTC GTACCGCGCG TTATCGGGTA CAGGCGTATG TGTTTTCTTC ATTACTCGCG
GCGCTGGGTG GCATCTTACT GGCATCACGC ATAGGCTCTT CTCAGGTCAA TGCTGGTGGT
GGCTATTTGA TGGATGCCGT TGCCGCGGCC TACATCGGTT TCTCGCTGGC GGGATCCGGC
AAACCGAACG CGCTGGGTAC GCTGCTCGGT GCTGTTATTC TTGGCGTCTT GCAGAATGGG
CTGGTGATGC TCTCCGTGCC TTACTACGCC ATGGATATCA TCAAAGGTCT GGTTCTGGCG
CTCGCGCTGG CAATGACGTA TATCCAGAAA CGCTGA
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| Protein sequence | MSHPLSSNGA LPFRHHVFEF LYKWGMLITV VALITLFGLA SDNFLDPYNI INILRSIAIV
TVIAIGVSIS LSVGGFDLSV GSTASLANAL VISLFVWYGF GTTGAIVLTL LLCTLVGLFN
AFLIVVLKIP DMLATLASLF VIQGVAMTYS YGGSITQNMV LPSGEMAEGV IPEFFATLGQ
VPVIVVIMLA VTVLVQLYLS LTKHGRRMYA IGGNPEAARL AGIRTARYRV QAYVFSSLLA
ALGGILLASR IGSSQVNAGG GYLMDAVAAA YIGFSLAGSG KPNALGTLLG AVILGVLQNG
LVMLSVPYYA MDIIKGLVLA LALAMTYIQK R
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