Gene PC1_1660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1660 
Symbol 
ID8132602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1912710 
End bp1913678 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content51% 
IMG OID644864948 
Productglycerate dehydrogenase 
Protein accessionYP_003017237 
Protein GI253688047 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000530389 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTTAA AAATTACCTT TTTGGATAAA GGCTCACTGC CTGAAACCAT TTTCCTGAAA 
AAGACGAATT TTAGGCGTCC ACAATGCCGC CATGAATGGA TTGAATATTG CTACACCTCG
CCCGAGCACG TTATCGACCG AGCCAAAGAT ACCCACGTTA TCATTACGAA TAAAGCCTTA
TTAACGCGTG ACACTTTAGC CGCGTTGCCT GCACTGAAGC TGATTGCCGT GACGGCAACG
GGAACCGACA ATATCGATCT TGTTGCTGCC AAAGAGCTGG GTATCACGGT CAAAAATGTA
CCTGGCTATT CGACGCAAGC CGTGTCTGAA CACGTGATTG CCATGATTTT TGCGCTAAAG
CACAGCTTGA TGGCGTGGTA TCGCGATCAA TTGGGCGATC GCTGGGCCAG CCAGTCGCAA
TTTGCCTATT TTGATCACCC CGTCAAGGAC ATCGCAGGCG CGACGCTGGG CATCATCGGT
GCGGGTACGA TTGGCCGGGA AGTTGCGCGA CTGGCGCAGG CGCTGGGGAT GAAGGTGATT
TTTGCCGAGC ATCGTGGAGT CTCACTGTGT CGTGCTGGCT ATCTGCCGTT TGAAGACGTG
CTGCGGCTAG CGGATGTGGT TTCACTCAAC TGCCCGTTGA ATGCCAGTAC GCAGCACCTG
ATTAATGCGG AGACGCTTGC GCTGTGTAAG CCCACTGCGT TTCTTATTAA TACTGCCAGA
GGTGGGTTGA TTGATGAAAA CGCGCTGGCA GCGGCATTGC AGCAGCGCGT CATTGCTGGT
GCTGCGCTCG ACTGTCTAAC GCAGGAACCG CCGCAAAAAG ACAATCCGCT GATGGTCGCG
GCGAAAACCC TGCCGAATCT TCTGATTACA CCGCATATCT CCTGGACGTC TGCCTCATCA
CTGCAATTGT TGATGGAAAA GACGATTGAA AATATTGATG AGTATGCCCA GCAGAATGGA
TACAAATAA
 
Protein sequence
MMLKITFLDK GSLPETIFLK KTNFRRPQCR HEWIEYCYTS PEHVIDRAKD THVIITNKAL 
LTRDTLAALP ALKLIAVTAT GTDNIDLVAA KELGITVKNV PGYSTQAVSE HVIAMIFALK
HSLMAWYRDQ LGDRWASQSQ FAYFDHPVKD IAGATLGIIG AGTIGREVAR LAQALGMKVI
FAEHRGVSLC RAGYLPFEDV LRLADVVSLN CPLNASTQHL INAETLALCK PTAFLINTAR
GGLIDENALA AALQQRVIAG AALDCLTQEP PQKDNPLMVA AKTLPNLLIT PHISWTSASS
LQLLMEKTIE NIDEYAQQNG YK