Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1660 |
Symbol | |
ID | 8132602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1912710 |
End bp | 1913678 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644864948 |
Product | glycerate dehydrogenase |
Protein accession | YP_003017237 |
Protein GI | 253688047 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000530389 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGTTAA AAATTACCTT TTTGGATAAA GGCTCACTGC CTGAAACCAT TTTCCTGAAA AAGACGAATT TTAGGCGTCC ACAATGCCGC CATGAATGGA TTGAATATTG CTACACCTCG CCCGAGCACG TTATCGACCG AGCCAAAGAT ACCCACGTTA TCATTACGAA TAAAGCCTTA TTAACGCGTG ACACTTTAGC CGCGTTGCCT GCACTGAAGC TGATTGCCGT GACGGCAACG GGAACCGACA ATATCGATCT TGTTGCTGCC AAAGAGCTGG GTATCACGGT CAAAAATGTA CCTGGCTATT CGACGCAAGC CGTGTCTGAA CACGTGATTG CCATGATTTT TGCGCTAAAG CACAGCTTGA TGGCGTGGTA TCGCGATCAA TTGGGCGATC GCTGGGCCAG CCAGTCGCAA TTTGCCTATT TTGATCACCC CGTCAAGGAC ATCGCAGGCG CGACGCTGGG CATCATCGGT GCGGGTACGA TTGGCCGGGA AGTTGCGCGA CTGGCGCAGG CGCTGGGGAT GAAGGTGATT TTTGCCGAGC ATCGTGGAGT CTCACTGTGT CGTGCTGGCT ATCTGCCGTT TGAAGACGTG CTGCGGCTAG CGGATGTGGT TTCACTCAAC TGCCCGTTGA ATGCCAGTAC GCAGCACCTG ATTAATGCGG AGACGCTTGC GCTGTGTAAG CCCACTGCGT TTCTTATTAA TACTGCCAGA GGTGGGTTGA TTGATGAAAA CGCGCTGGCA GCGGCATTGC AGCAGCGCGT CATTGCTGGT GCTGCGCTCG ACTGTCTAAC GCAGGAACCG CCGCAAAAAG ACAATCCGCT GATGGTCGCG GCGAAAACCC TGCCGAATCT TCTGATTACA CCGCATATCT CCTGGACGTC TGCCTCATCA CTGCAATTGT TGATGGAAAA GACGATTGAA AATATTGATG AGTATGCCCA GCAGAATGGA TACAAATAA
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Protein sequence | MMLKITFLDK GSLPETIFLK KTNFRRPQCR HEWIEYCYTS PEHVIDRAKD THVIITNKAL LTRDTLAALP ALKLIAVTAT GTDNIDLVAA KELGITVKNV PGYSTQAVSE HVIAMIFALK HSLMAWYRDQ LGDRWASQSQ FAYFDHPVKD IAGATLGIIG AGTIGREVAR LAQALGMKVI FAEHRGVSLC RAGYLPFEDV LRLADVVSLN CPLNASTQHL INAETLALCK PTAFLINTAR GGLIDENALA AALQQRVIAG AALDCLTQEP PQKDNPLMVA AKTLPNLLIT PHISWTSASS LQLLMEKTIE NIDEYAQQNG YK
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