| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1659 |
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| Symbol | |
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| ID | 8132601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1910123 |
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| End bp | 1912267 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644864947 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003017236 |
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| Protein GI | 253688046 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000365717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGAA ATTCTCTGAT TAATCTCAAG AATGCAGTCG CACTGGCTCT GGCGGCCACA
GCAACAAATG TCGCGATAGC GGCAGGTAGT GATGATGTTT TAGTTGTCAC CGCGAGTGGT
TATGAGAAAA AGTTGACGAA CGCACCAGCG TCCATTTCTG TCGTCAGTGA GGAAGAACTC
TCGCAAAAAA GCTATCACGA TCTGGGAGAA GCGTTAAGTG GCGTGGAAGG GGTTGATGTG
CGCAGCGGTA CGGGCAAAAC CGGAGGACTG GATATCAGCA TCCGCGGTAT GCCGAGCAGT
TACACTCTGA TTCTGATCGA TGGTGTACGC CAGAATGCTA GCGGAGATAC CACGCCTAAT
GGTTTTGACA CCATGAATAC GGCGGTGATG CCGCCGTTGT CAGCCATTGA GCGTATTGAA
GTGATTCGCG GGCCGATGTC GACACTCTAT GGCTCCGATG CGATTGGCGG TGTGGTCAAC
ATTATCACCA AGAAAGACAG CAAGCAGTGG CGTGGCAGCG TGAATCTGTC ACATACGGTG
CAAGAACACC GTAAATGGGG TGACAGCTCC ACGCTGGGTT TCTATACCTC TGGTCCGTTG
GTGAACGATC AATTTAGTTT GGCATTGCGC GGTAATGTGG AACATCGTCA GGGATCAAGC
GTCACCTCAC TGAGCGGGAC GGGTGACACG CGTGTTCCTT TCCCGACCAA GACGGATAAC
TACACTGTCG GTGGGAAACT GAGCTTTAAA ACCAGCGACG CCAATACCCT GTGGATTGAT
GGTGATGTGT CACGCCAGAC TTACGATAAC CGCAGTAGCC AACTGGGCCC GATTGGTGTT
GGTGGCGGTG GATACCGCGA TGAATTGCGC TTTGAGCGTA ATAAACTGGC AATTGGCCAT
GATACCGACC TCTCGTTTGG TCGTTGGAGC TCAAACCTGT CCTATGCAGT GACCGAGAAC
AAAGGTCGCT TGCTGACACC ACGCGTGTTG AATACCGCTA ATGCAGGCCT TTCTGGTCGT
GACCGTGAAC TGAAGAATAC CAACACTATC TTCGATACGA TGCTCGTGTC GCCAGTCGGG
GAGGATCATC TGCTGACGGT TGGTGGGCAA TTCTGGGATG CACGCCTCAA AGACGGCATC
GTGCTGGCAA ACAGCGGTGA AACGTTCGAA CAAAAAAGCT GGTCGCTGTA TGCAGAAGAT
GACTGGCAGC TACTCGATCC TCTGTCTCTG ACGTTAGGTG CCCGCTATGA GAAACACGAT
AGCTTCGGTG GCCATCTGAG CCCGCGTGCT TATCTGGTAT GGAATGTCGC GGACGACTGG
ACGGTAAAAG GTGGTGTCAG TACGGGTTAC AAAACCCCCT CTCTGGCACA GTTACATAAT
GGCGTCAGCG GCGTTGCGGG GAATGGCTGG TCGACGGTTC TTGGTAATCC TAACCTGAAG
CCGGAAGAAA GCACCAACTT TGAGACGGGG CTGTACTATG AGAATGCCGC GAATGTAAAA
GCTAACATCA CCGGTTTTGT GAACAGTTAC AAAAACAAAA TTGATAGCTA TACGATTAGC
AGCAATAGAA TAACGTTGCC AAATGGTAGG GTGGTTACGG AAAGCGTTGG CTCTAGCCGC
AACATTGGTA AAGCCAGAAC TCAGGGTGTT GAATTCGCAA CGTCTTTCCC TGTGGTTGTT
CCAGAATTAA CGCTGGGACT GAATTATACC TATACACGCA GTGAGCAAAT CGGTGGGGAT
AATCCTGGCG CTGCACTCAC TAACACCGCT AAGCATATGG CGAATGCTCG CCTGAACTGG
CAAATTGACG AGCAGTGGGC TACCTGGCTG GCCGCCGAAT ATCATGGCAA AACTCCGCGT
TTTCTCAGCA ATTATGCCAA TCTGAGTGAT GATGAGAAGC TGGTGTATAA TGCGCGCGGT
GCCAACCTGA AAGCGTGGAC GGTGGTAAAT TTAGGTGCCT CTTACAAAGT GACGAAAGAT
GTTACTCTGA ATGGTACGGT GAACAATTTA CTGGATAAGG ACTTCTCCCA AGTACAATCG
TATAACGGAT ACTACGCGGG TGATTACTTT GACTCCAGCC GTTCTACGAC AGGTTATGTC
ACCCCGGGTC GTAACTATTG GATGTCAGTC AACGTTAATT TCTGA
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| Protein sequence | MKGNSLINLK NAVALALAAT ATNVAIAAGS DDVLVVTASG YEKKLTNAPA SISVVSEEEL
SQKSYHDLGE ALSGVEGVDV RSGTGKTGGL DISIRGMPSS YTLILIDGVR QNASGDTTPN
GFDTMNTAVM PPLSAIERIE VIRGPMSTLY GSDAIGGVVN IITKKDSKQW RGSVNLSHTV
QEHRKWGDSS TLGFYTSGPL VNDQFSLALR GNVEHRQGSS VTSLSGTGDT RVPFPTKTDN
YTVGGKLSFK TSDANTLWID GDVSRQTYDN RSSQLGPIGV GGGGYRDELR FERNKLAIGH
DTDLSFGRWS SNLSYAVTEN KGRLLTPRVL NTANAGLSGR DRELKNTNTI FDTMLVSPVG
EDHLLTVGGQ FWDARLKDGI VLANSGETFE QKSWSLYAED DWQLLDPLSL TLGARYEKHD
SFGGHLSPRA YLVWNVADDW TVKGGVSTGY KTPSLAQLHN GVSGVAGNGW STVLGNPNLK
PEESTNFETG LYYENAANVK ANITGFVNSY KNKIDSYTIS SNRITLPNGR VVTESVGSSR
NIGKARTQGV EFATSFPVVV PELTLGLNYT YTRSEQIGGD NPGAALTNTA KHMANARLNW
QIDEQWATWL AAEYHGKTPR FLSNYANLSD DEKLVYNARG ANLKAWTVVN LGASYKVTKD
VTLNGTVNNL LDKDFSQVQS YNGYYAGDYF DSSRSTTGYV TPGRNYWMSV NVNF
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