| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1651 |
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| Symbol | |
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| ID | 8132593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1899719 |
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| End bp | 1900897 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644864939 |
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| Product | sugar efflux transporter |
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| Protein accession | YP_003017228 |
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| Protein GI | 253688038 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00899] sugar efflux transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0566929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCACTC CAGCAAACAC AACACGACGC CCGCTTGACC TGACATCGTC AGCATTCCTG
GTTATTGCCT TTCTGACCGG AACGGCCGGC GCCCTGCAAC TTCCTACGCT CAGCCTCTTT
CTTTCCAGCG AAGTACAAGC TCGTCCTTTC CTGGTGGGGA TGTTTTATAC CGGAAGTGCA
GTTATTGGCA TTGTCGTCAG CCAAATGCTG GCCACGCGCT CGGACCGTCA AGGCGATCGC
AAATCCCTGA TCTTCGTCTG CTGCCTGCTG GGCGCACTGG CCTGCATGCT GTTTGCATGG
AATCGTAACT ACTTTATTCT GCTTTTTATC GGCGTTCTGC TGAGCAGCTT TGGCTCAACC
GCGAACCCGC AGCTCTTTGC GCTGGCGCGG GAGCACGCGG ATAAAACCGG CCGAGAAGCG
GCAATGTTCA GCTCCATCCT CCGCGCCCAG ATTTCTCTCG CCTGGGTTGT TGGCCCCCCT
ATCGCTTTTG CACTGGCGCT GGGCTTCGGC TTCACAACGA TGTATCTGAC CGCTGCGGCC
GTCTTTATCC TGTGCGGTAT TCTGGTCAAA CTCTTCTTAC CTTCCATGCC CAAAACCGTG
GAAAAGACCA CCTCTACGCT GGAATCACCA CGTCGCAATC GCCGGGACAC GCTCTTGCTG
TTCGTTGCCT GTACCTTGAT GTGGACTTGC AACGGTATTT ACCTCATTAA TATGCCGCTG
TATCTGGTGC ATGAACTGCA TCTACCGGAA AAGCTGGCCG GTATCATGAT GGGTGTGGCT
GCCGGGCTGG AAATTCCGGT CATGCTGATT GCCGGTTACG TCGCTAAACG CTTTGGGAAA
CGTTTCCTGA TGCGGCTTGC CGTTGCCTCC GGGCTACTGT TTTTCGGCGG CTTGCTGGTT
CTCGACGGGG AAATAGCCCT GCTGGTGTTA CAGGCGCTAA ATGCCATTTT CATTGGTATT
CTGGCCGGAA TCGGCATGCT TTATTTCCAG GATTTGATGC CTGGACAAGC GGGTGCAGCG
ACGACGCTGT TTACCAATAC CACGCGCGTT GGCTGGATCA TCTCTGGTTC ACTGGCTGGG
ATCGTTGCTG AAATCTGGAA CTATCATGCA GTCTTCTTCT TCGCGCTGCT GATGATCGCC
GGTTCCATCT ATTGCATGTG GCGGATCAAG GACGCCTGA
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| Protein sequence | MFTPANTTRR PLDLTSSAFL VIAFLTGTAG ALQLPTLSLF LSSEVQARPF LVGMFYTGSA
VIGIVVSQML ATRSDRQGDR KSLIFVCCLL GALACMLFAW NRNYFILLFI GVLLSSFGST
ANPQLFALAR EHADKTGREA AMFSSILRAQ ISLAWVVGPP IAFALALGFG FTTMYLTAAA
VFILCGILVK LFLPSMPKTV EKTTSTLESP RRNRRDTLLL FVACTLMWTC NGIYLINMPL
YLVHELHLPE KLAGIMMGVA AGLEIPVMLI AGYVAKRFGK RFLMRLAVAS GLLFFGGLLV
LDGEIALLVL QALNAIFIGI LAGIGMLYFQ DLMPGQAGAA TTLFTNTTRV GWIISGSLAG
IVAEIWNYHA VFFFALLMIA GSIYCMWRIK DA
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