| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1646 |
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| Symbol | spr |
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| ID | 8132588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1895998 |
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| End bp | 1896582 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644864934 |
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| Product | putative outer membrane lipoprotein |
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| Protein accession | YP_003017223 |
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| Protein GI | 253688033 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.79512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTCAAGT CTCAACCGAT TCTGAGATAT ATCTGGCGGG CAGTGCCTGC CGTCGCGGTA
GCAATGATGC TCTCCGCATG TGGAAGTAAC AGTGCATATA ACCATAAAGC TCAAACTGAT
ATGCATGCAG TTAATGATAA AGATGGTCTT TTACTGCAAG CCTCTCAGGA TGAATTTGAA
GCATTGGTTC GTAATGTGGA CATCAAGTCC AAATTGCTCA ACCAATATGC CAGTTGGAAA
GGTGTTCGTT ATCGCTTAGG TGGTGATAGT CGCCGTGGCA TTGATTGCTC AGCTTTCGTT
CAGCGCACTT TCCGCGAACA GTTTGGCATG GATTTACCGC GTTCAACCTA TGAACAGCAA
GAGATGGGCC AGAAAATTCA GCGCAACAAA CTGCGCGTTG GCGATCTTGT TCTGTTCCGT
GCGGGTTCAA CCGGACGCCA CGTTGGCATT TATCTCGGCA ACGATCAGTT CGTCCACGCG
TCAACCAGCA GCGGCGTCAT TATTTCAAAA ATGACGGAAG ACTACTGGAA TAAGCGTTAT
CAAGAAGGAC GCCGTGTTCT GAGTAAAGGA ACCACTACCA GCTAA
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| Protein sequence | MVKSQPILRY IWRAVPAVAV AMMLSACGSN SAYNHKAQTD MHAVNDKDGL LLQASQDEFE
ALVRNVDIKS KLLNQYASWK GVRYRLGGDS RRGIDCSAFV QRTFREQFGM DLPRSTYEQQ
EMGQKIQRNK LRVGDLVLFR AGSTGRHVGI YLGNDQFVHA STSSGVIISK MTEDYWNKRY
QEGRRVLSKG TTTS
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