Gene PC1_1618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1618 
Symbol 
ID8132559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1868799 
End bp1870418 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content31% 
IMG OID644864905 
Producthypothetical protein 
Protein accessionYP_003017195 
Protein GI253688005 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0866134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAACA CATATAACAT ATATAGATTC AATCTCTCTA AGTTACAACC GTTGCTAGAT 
AAGGCAACAT CTGTTGGACT GGTAAAGCAG AAAGAAAAGC AAGTAGATGG CTATAAAATG
GAGTTCTATT TTTCAGAGGA TTTAGATGGG AATCCTATAT GGTGGTGGGA TACATACAAA
AATTTCTTTA AAGATGATGT GACAGAGCCT AAAAATACAT TCTATTATGG GTTGTTGATT
TGCATTAAGA ATGGAGAGGA GAAACATGGA TTCGCTATTA CATTGGGAAA ATCTCATTTT
TATGTGAATA AATTTATCGA TAGAGATTTT GGTATCGAAT TAGCAGTGCG TATTGCAAGT
GAAGAAACTA TTCTTCTTAA AAAAAGTACA TATTTTTCTG GCTCTAAAAA ACAGGATATA
TCTTCATATA AAGAATTTAT AAAAGATAGC TATGAACCTG GTGAGTCTGT AGACCATTTA
AAACTGAAAG CCACAGATCA AGAGGTTTGG GGAGCAAAAA ATATAATATT TGCTGATTCT
ATACAAATGG ATATTGAAAA GAAACCAGAT GGGTTAGCTG AGGTTTTTAA CAAAATATTA
CATGCAATGG GTAACGATGA AAGCATACGC TTACCTAAAA GAGAGATAGT TTCTGATGAG
TCGACTATTG AAGGTTTAGA TCAAACACTA TTTAACTCAT TAAAAAAAAA TGATGCCTCG
CTTAGAATGG ATGAATTTCA GGTTTATGGT GTTAATTTTT GTTTTAGTTT TACTGAGTAT
AATTATGAAA TATCAATGAA AAATGGTAGG AAGTATTTTG ATAGACAAAA TCTTGATAAT
GAATTAACTA TTGAAAATAT ATCAAATTAT GTGAATAATC ACGATGAAAT CACATCATTA
GATAGTATTT ATATTTCATT CTCAATAGAA GATAAAGGAA GTAGATTTGT TAAGCCTCTT
AAAGAGTTAT TAGATATTCA TATTCAAAAA GATGATCTTA ACTTCTTTTT GAGTAATGGC
GATTGGTGTT GTTTTAATCA GCCATTTCTC AGCTATCTAG GTGATTCTCT TAATGGTATA
GAGTTCATAA TCCGTGAGCC ATTACATGAA AGTGATTATC AACGTTGGCG TGCCATAAAA
GAAGATAAAA TAGTAAAGGG GGAAGATATC GATAATAAAC TGACTTATAG AGAGCATTAC
TTTAATGATA AACAAGCAAA GGATAACGGT TTTGATCTGT TAGATAGAGA ATTAGCACAG
ATAAACTCGA TTGAGTCGGG TAAAAGAAGA TATAAACTTG AAATAGCAGA TTTGTATAAA
GATGAGGAAA TAATATCAGT TAAAATTTCC TCAAAAGATA AAGAGCTTAT TTATAATATT
GAGCAATCTA AAGATTCCTT GGAGCTAATA ATTCGAAAAA CAGTAGCGTT CGACAGGGAA
TTGAAATACG CTGCACTTTG GTTCGTTTTT GAAGAGGACA TTCAGAGGAT CACAGAAAAG
AATTCAATTC AATTTTTACT CGCTTTGCAA TCTTGGAAAA AAGCAGTTAC TGATCACGGA
TTAACACCAA GAATATATTT TTCAAGACAT GTAAAATATA CAAATGAAAA TAATACGTGA
 
Protein sequence
MANTYNIYRF NLSKLQPLLD KATSVGLVKQ KEKQVDGYKM EFYFSEDLDG NPIWWWDTYK 
NFFKDDVTEP KNTFYYGLLI CIKNGEEKHG FAITLGKSHF YVNKFIDRDF GIELAVRIAS
EETILLKKST YFSGSKKQDI SSYKEFIKDS YEPGESVDHL KLKATDQEVW GAKNIIFADS
IQMDIEKKPD GLAEVFNKIL HAMGNDESIR LPKREIVSDE STIEGLDQTL FNSLKKNDAS
LRMDEFQVYG VNFCFSFTEY NYEISMKNGR KYFDRQNLDN ELTIENISNY VNNHDEITSL
DSIYISFSIE DKGSRFVKPL KELLDIHIQK DDLNFFLSNG DWCCFNQPFL SYLGDSLNGI
EFIIREPLHE SDYQRWRAIK EDKIVKGEDI DNKLTYREHY FNDKQAKDNG FDLLDRELAQ
INSIESGKRR YKLEIADLYK DEEIISVKIS SKDKELIYNI EQSKDSLELI IRKTVAFDRE
LKYAALWFVF EEDIQRITEK NSIQFLLALQ SWKKAVTDHG LTPRIYFSRH VKYTNENNT