| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1600 |
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| Symbol | |
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| ID | 8132541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1853169 |
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| End bp | 1854854 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644864888 |
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| Product | DNA-binding protein |
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| Protein accession | YP_003017178 |
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| Protein GI | 253687988 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4688] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.11105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAATG TGACCGTATT CAAATCTCAG GCTGCATTGA GTGTGGAAAG GAATACCGCT
GATTTTATTG TTTTTTGCCG GGATAAGCTG ACCGTATTTG GTGCGGATTT GGACTGGCAC
TCACCTGTCT GGAAAGGCAT TGCAACGTTC CGCAAGCTGG GGACGGAGAG ATGTGTATTG
AGACATGAAG ATGTCATGGA CAGCGATTTC ATTTCTTTTG CCAAAAGCTA CCTTCGCTAT
AATCAGGCTT TACGTCCGGT CAAAAATCAC GGTGCGGCAC TCATGGCACT GAAGTGTCTG
GAAAAAGCGT TGTTGCAGGT TTGCCAGAAT GCCCATATCT ATAACACGTC GGTTTTAGTG
CTGGACGAAG CGATGCAGGC CGCCAGACAG TATTATGAAA GTAATGTGTT ATACCAGTGT
GGCGCACAGC TTGAGAAACT GGCGCAGTTT CTTACGGATC ATCACTTCGT CACCTGTGGT
TTTTTTCGCT GGCGCAATCC GACTAAACCG GATATGAAAA ATCACTACCT TCCTGAGAAA
GACGATCCCG ACAGAAAGCA TAAATTACCG GACGAACGGG CTGTATTCGC CATCGCTGAA
ATTTTTTCAC GACCGGATGA TGAACTCAGT GAGCGTGATT TGTTTACCAC CTCAGTTTTT
GCCTTGCTGA TGTGCTCACC AAGCCGTATT TCAGAAATTC TGGCATTACC GGCAGACTGT
GAGATCACCC GAAAAGATAA AAATGGCGTG GAGCGTTACG GGCTTCGCTT TCATGCCGTC
AAGGGCTATG GAGCCACAAT CAAGTGGGTG CCGGATGTTA TGGTGCCTGT CGCCAGAAAA
GCAGTCAGCC GGTTGCGCAG CCTGTCGGAA AACGCACGTT CAGTCGCGCG ACGGGCAGAA
AAGCAAAAGC ACTCAGAAAA ACGGGCTTCC CATGAGTCTT CCATGAAAGA GCCGCTCTCA
CCCGATGTGA TGCAGGCTCT GCCTGCGGAT TTCCCCTGGT TTGATAAAGA AAAACTCGTG
CCATACAGCA ACGCGCTGTG TCTGCTGAAC AAATATCAGT GCTGTCAGAA AAGACAGACG
AGAGCTTTTC AGATTTTCAG GCCAGCGTAT CATTTCTTTG AATCTGATAT CGCGAAGATG
ACATCTTCCG GCGCGGTGAA GAACATCTTT GCGCGTTATG GTTATACCGA TGATGAAGGG
AGCCCCTTAT TTCTGCGCTC CCATCAGCCG AGACACCTTC TCAACACGCT GGCGCATCAT
GGTGAACTCT CCGAACTGGA CATCGCCAAA TGGTCAGGCA GGGTCAGTGT CATACAGAAC
CGTGCCTATA ACCATGTTTC TCAGGAAGAG ATGCGCGAGA AAATCCAGGG ACTGAAGCTG
GGCGCTCGCG GCTACACGTT GCCTGTCAGT ATCCCCGTTA TCACAGAAGA GCCGGATCAC
GGTGCGGTTC ACGTCACGCC CTACGGTTAT TGTGTTCATG ATTATCTGAT GCTCCCCTGT
CAGAAATTAG CCAGCACGTT GCATTATGGC TGGGCAGAGG GAATGAATGA GCATGAGCGT
ATCGAAAAAG TCCGTCAGCA CCTTCAGATA GCGAAAAAGG CGGTAAAAGA CGAGTATTTT
GGTGCTGATA AGTGGGTGGC GCATCACGAA GCCGTATTAT CGGTTTTAGA GAAAATGCAG
AAATAA
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| Protein sequence | MGNVTVFKSQ AALSVERNTA DFIVFCRDKL TVFGADLDWH SPVWKGIATF RKLGTERCVL
RHEDVMDSDF ISFAKSYLRY NQALRPVKNH GAALMALKCL EKALLQVCQN AHIYNTSVLV
LDEAMQAARQ YYESNVLYQC GAQLEKLAQF LTDHHFVTCG FFRWRNPTKP DMKNHYLPEK
DDPDRKHKLP DERAVFAIAE IFSRPDDELS ERDLFTTSVF ALLMCSPSRI SEILALPADC
EITRKDKNGV ERYGLRFHAV KGYGATIKWV PDVMVPVARK AVSRLRSLSE NARSVARRAE
KQKHSEKRAS HESSMKEPLS PDVMQALPAD FPWFDKEKLV PYSNALCLLN KYQCCQKRQT
RAFQIFRPAY HFFESDIAKM TSSGAVKNIF ARYGYTDDEG SPLFLRSHQP RHLLNTLAHH
GELSELDIAK WSGRVSVIQN RAYNHVSQEE MREKIQGLKL GARGYTLPVS IPVITEEPDH
GAVHVTPYGY CVHDYLMLPC QKLASTLHYG WAEGMNEHER IEKVRQHLQI AKKAVKDEYF
GADKWVAHHE AVLSVLEKMQ K
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