| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1597 |
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| Symbol | |
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| ID | 8132538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1850060 |
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| End bp | 1850278 |
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| Gene Length | 219 bp |
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| Protein Length | 72 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644864885 |
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| Product | phage transcriptional regulator, AlpA |
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| Protein accession | YP_003017175 |
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| Protein GI | 253687985 |
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| COG category | [K] Transcription |
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| COG ID | [COG3311] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATACCC AGAATCGCCT TATTCGTTTC CCCGAAGTAA TGAGAAAAAC CGGCTTTGGA
AAAGCCTGGC TCTATCGTCT TATTAATGAA GAGCGTTTCC CCCAACCTGT AAAAATCGGT
ATCCGTGCTG TTGCGTTTGT TGAAAATGAA ATTGATGAAT GGATAGTGGT CGCTATCGAG
AAAAGAAAAC CCTTGAGAAA ACGTAAAGAA ATCCAGTGA
|
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| Protein sequence | MNTQNRLIRF PEVMRKTGFG KAWLYRLINE ERFPQPVKIG IRAVAFVENE IDEWIVVAIE
KRKPLRKRKE IQ
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