Gene PC1_1596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1596 
Symbol 
ID8132537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp1849112 
End bp1849981 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content42% 
IMG OID644864884 
Producthypothetical protein 
Protein accessionYP_003017174 
Protein GI253687984 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACT TGTCGGACAA ACACATTAAG GAAATCAAAA AATGGCTGAA TATCGATACA 
TATCGTCAGT TTGAAAACAT ACCTCTTGAG CGGCTTTATC ATGAGCTAGT GATGAGGTCG 
TTATTTTTTA AATCTGATAA TGGAGATTCT GACGTTATAC TGGCTAAAAT TTATGCAGGC 
AGTCTCTTTC GTGGTGATCC ATTCCTCATT ACAGATAGTC ATATGGTTCA GCTTAAAACA 
GAAGACAGGC TTGCCTTATC CCCATACTTC TCTATAACAA CGACCGGAAG GCTGGCAGAT 
CTTTGTATCT ACGGGATAGG GAAGTCGCTA TTTGGCCTGC ATAATGTTGA TGAGTATTGG 
GTAGATGAAA AAATCTATAA CATCCCTATT GCAGAGACTA TGCCGGTATT ATTTCAACAC 
AGTGTGATGA TCGAGATAGA TCTCACTGCT GGCACTGACG AAGAAATTGC TGAATCACTG 
AAAGCGGTGC TTCCTCAGTG GCGTAAAATG CGGGGGATTG AGCCAGAACC ATCAGACTCT 
GTTCGCTTTG GCTATGGAAC GATTAAGAAA ATTATCAATT ACAGGCTGCT CGCGATACTT 
GACATACTTA TCTGGGCAAA GCGCAATGAT ATCCGGGTGT CAGATGATCG CCTTTCCACT 
CTGCTCCACA GCGATACTGA TGAGGAAGAT AAAACAAGAT CGGGTAGTCG CATAAAGGAT 
ACCGACAAAC CCCTTGCGAT TAAAACAGTC AGTAAGTCAT TCATCCTTCA GTTTCATCAT 
TTTCTCAACA AGAATCCCGA CTTGAGAGAT ACAAAAGTGT CTGAGGTCAT GAAACGCGCA 
GATAAGGAGG CAGATAAGGA GAAAAATTAG
 
Protein sequence
MKNLSDKHIK EIKKWLNIDT YRQFENIPLE RLYHELVMRS LFFKSDNGDS DVILAKIYAG 
SLFRGDPFLI TDSHMVQLKT EDRLALSPYF SITTTGRLAD LCIYGIGKSL FGLHNVDEYW 
VDEKIYNIPI AETMPVLFQH SVMIEIDLTA GTDEEIAESL KAVLPQWRKM RGIEPEPSDS 
VRFGYGTIKK IINYRLLAIL DILIWAKRND IRVSDDRLST LLHSDTDEED KTRSGSRIKD 
TDKPLAIKTV SKSFILQFHH FLNKNPDLRD TKVSEVMKRA DKEADKEKN