Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1591 |
Symbol | |
ID | 8132532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1845316 |
End bp | 1845852 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644864879 |
Product | Rhodanese domain protein |
Protein accession | YP_003017169 |
Protein GI | 253687979 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0607] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0149932 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAACAC CACTTGCTAT CTCACCTGCT CAGGCCCGCA AATTGTTAGA TGAAGGGGCG ATACTGATTG ATATTCGCCA GCCGGAAGAG TACGCCCGTG AGCACATCGC ACAAGCGAGG TTGCAGCCGC TGAATTCCTC TGCTGGATAT GTTCTCCCTG ATGATGGCAG GGAGGGTCAG ACGGTGATTT TCCACTGCTT ATCCGGCATG CGCTCGGAAC AGAATGCTGG CTTGCTGGCA CAGGCGGCGT CACCCGCAAC GGTTTTTCTT CTGGAAGGGG GAATGGCCGC ATGGAAAAAG GCGGGGTTTC CGACAGAGGT GGATCGTAAG CAGCCGATTG AACTCATGCG GCAGGTTCAA ATCGCCGCTG GTGCACTTAT TCTGAGTGGT GTATTACTGG GCTACAGCGT AAGCAGCGCT TTCTTCCTGC TCTCTGGTTT TGTTGGGGTT GGGTTGCTGT TTGCTGGGGT AACCGGTTTT TGCGGTATGG CAAGGCTGTT AATGAAAATG CCGTGGAACC GTGACGCCAA ACGCTGA
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Protein sequence | MPTPLAISPA QARKLLDEGA ILIDIRQPEE YAREHIAQAR LQPLNSSAGY VLPDDGREGQ TVIFHCLSGM RSEQNAGLLA QAASPATVFL LEGGMAAWKK AGFPTEVDRK QPIELMRQVQ IAAGALILSG VLLGYSVSSA FFLLSGFVGV GLLFAGVTGF CGMARLLMKM PWNRDAKR
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