Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1584 |
Symbol | glnH |
ID | 8132525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 1837635 |
End bp | 1838381 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644864872 |
Product | glutamine ABC transporter periplasmic protein |
Protein accession | YP_003017162 |
Protein GI | 253687972 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.118123 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCAC TACTTAAGGC CTCTTTGGCT GCACTGACGC TGATGATGAG CGTATCTAGC TATGCTGCTG AAAAAGAACT GATTGTCGCC ACAGACACCG CGTTCGTCCC TTTTGAGTTC AAACAAGGCG ACAAGTACGT CGGTTTTGAC ATCGATCTCT GGGATGCTAT CGCTAAACAG CTCAACCTGA AGTACACCCT GAAGCCAATG GACTTCGGCG GCATTATTCC TGCACTGCAA ACACGTAACA TCGATCTGGC GCTGGCAGGT ATTACCATCA CTGAAGAGCG CAAAAAAGCA ATCGATTTCT CTGACGGCTA CTACAACAGC GGCCTGCTGG TGATGGTCAA AGCAGACAAC AACGACATCA AAGGCGAGCA GGATTTAGCC GGTAAAGTGC TGGCGGTGAA GAGTGGCACA GGTTCTGTTG ATTACGCGAA AGCCAATATC AAAACCAAAG ATCTGCGCCA ATTCCCGAAC ATCGACAATG CCTATATGGA ACTGGGCACC AACCGTGCTG ACGCCGTGCT GCACGACACG CCAAATATTC TCTACTTCAT CAAAACCGCA GGCAATGGCC AGTTTAAAGC GGTAGGTGAT TCCATTAAAG CCCAGCAATA CGGCATCGCG TTCCCGAAAG GCAGCAACGA ACTGCGTGAA AAAGTGAATG GCGCCCTGAA AACACTGCGT GAAAACGGCA CTTATGCTGA GATCTACAAG AAGTGGTTTG GCGTAGAACC TAAGTAA
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Protein sequence | MKSLLKASLA ALTLMMSVSS YAAEKELIVA TDTAFVPFEF KQGDKYVGFD IDLWDAIAKQ LNLKYTLKPM DFGGIIPALQ TRNIDLALAG ITITEERKKA IDFSDGYYNS GLLVMVKADN NDIKGEQDLA GKVLAVKSGT GSVDYAKANI KTKDLRQFPN IDNAYMELGT NRADAVLHDT PNILYFIKTA GNGQFKAVGD SIKAQQYGIA FPKGSNELRE KVNGALKTLR ENGTYAEIYK KWFGVEPK
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