Gene PC1_1582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1582 
SymbolglnQ 
ID8132523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1836230 
End bp1836952 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content52% 
IMG OID644864870 
Productglutamine ABC transporter ATP-binding protein 
Protein accessionYP_003017160 
Protein GI253687970 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.42936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAT TTAAAAACGT ATCCAAACAC TTTGGCAAGA CACAGGTCTT ACATAATATC 
GATCTCACCA TCGGCCAGGG TGAAGTTGTG GTCATCATCG GGCCGTCAGG CTCGGGTAAA
TCCACGCTGC TGCGCTGCAT CAATAAGCTG GAAGAAATTA CCAGCGGCGA ATTGATTGTT
GACGGCCTAA AGGTGAACGA TCCGCGCGTT GACGAGCGTT TAATCCGTCA GGAAGCCGGG
ATGGTATTCC AGCAGTTCTA CCTGTTCCCA CATCTTACCG CGTTGGAAAA CGTCGCATTC
GGCCCTATTC GGGTACGCGG CGCGAACAAA GCCGATGCCG AGAAACTGGC GCTGGAATTA
CTGGCGAAAG TGGGTCTGTC AGAACGTGCG CATCACTACC CTTCCGAGCT TTCCGGCGGT
CAACAGCAGC GTGTGGCCAT CGCCCGTGCT TTAGCCGTTA AACCAAAGCT AATGCTGTTT
GATGAGCCGA CGTCTGCTCT CGACCCGGAA CTGCGTCACG AAGTGCTGAC CGTCATGAAA
GATCTGGCCG AAGAAGGTAT GACAATGGTC ATCGTCACCC ACGAAGTAGG CTTTGCCCAT
AAAGTGGCTT CTCGTCTGAT CTTTATTGAT AAAGGCCGCA TCGCTGAAGA TGGCAACCCG
GAAACGCTAA TTACGAATCC ACCCAGCGAC CGCCTGCGTG AATTCCTGCA ACACGTATCC
TGA
 
Protein sequence
MIEFKNVSKH FGKTQVLHNI DLTIGQGEVV VIIGPSGSGK STLLRCINKL EEITSGELIV 
DGLKVNDPRV DERLIRQEAG MVFQQFYLFP HLTALENVAF GPIRVRGANK ADAEKLALEL
LAKVGLSERA HHYPSELSGG QQQRVAIARA LAVKPKLMLF DEPTSALDPE LRHEVLTVMK
DLAEEGMTMV IVTHEVGFAH KVASRLIFID KGRIAEDGNP ETLITNPPSD RLREFLQHVS