| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1581 |
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| Symbol | |
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| ID | 8132522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1834311 |
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| End bp | 1836179 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644864869 |
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| Product | peptidase M3A and M3B thimet/oligopeptidase F |
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| Protein accession | YP_003017159 |
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| Protein GI | 253687969 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.883937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACAGG TAGCGGACTA TTTTAACGCC TTGAATCGCG ACTATCTTGC GGTTCATCAG
GCGAAAGAAG AACTGTTTTG GCAACTGTAT ATGGGAACTG GCGACGATGA GGTGTCCGAG
CGTTTCTCCG CCGCAGAAAG TGCGTATAAA CGCTTTATTT CACAGCCGCG ACGTTTGGCT
GAGCTAAGAA CCCAGCTTGC AACACTGGAA AGCAGCCCAC GTGATGAACA ACAGCAGGCG
CTGTTACACG GCTTGCAAGG CTGGTATCGG TTTTTCGACT GCAATGTGAT TGAAGATCCA
CAGGCTCAGG CGCTGATGGA TGAGATTATT GCTGCTGAAA GTGCGCTATA CGCCAAGCGT
AAATCCTATG AAATGACGCA TCTGGATGCT AAGGGGGAGC GTGTTTCTGC CTCGCTCGGA
GAGCTGCTGA CCAATCAGAC GACCAATGAT ACTGAGGCCT ATCGTCAGAG TTCTCAGCAG
GCGCTGCGCG ATCTGGAGCA GTGGCTGTTG CAGAACGGTT TCCCCGAACT GATTTCACTG
CGTAACCGCT TTGCCCGTCA GATGGGTTAC CGGAATTATT TTGACTATAA GGTCAATAAA
ACGGAGCGGA TGACGCCGGA GCAGCTTTTT GCCATTCTCG ATCCTTTTGA AGAGCAGACC
CGTGAAGCGA ATGCCCGCAG CCTGAAAAAT CTGGCGAACG AAAAGGGCGA AGATGCGCTG
CAGCCGTGGA ATATTCGCTA TGCCAGCGCG GGCGATGTGA CGCGTCAGCT TGATCCTTAT
TTCCCTTTCT CGGCGTCGCT GGAGCGTTGG ATCAACAGCT TTAAGCGTTT GCGCATTGGG
TTTAACGGCG CAGAAATGCA GCTCGATTTG CTGGTACGCA AAGGTAAATA CGAGAACGGC
TTTATGCACG GCCCTGTGCC GCCGTTTGTG CAGGAAGGAA AATGGCTCCC TGCGCAGATT
AATTTCACCA GCCTGGCAAA GCCGGATCAA ATTGGTAGCG GTGCCAGCGG CATTAATACG
TTGTTCCATG AAGGTGGACA TGCTGCGCAC TTTGCCAATA TTAAGCAGAA TGCACCCTGT
TTCTCGCAGG AGTTTCCGCC AACGTCGATG GCCTATGCTG AAACGCAGTC CATGTTCTGT
GACAGCCTGT TGGGGGATGC TGACTGGTTA AAACGTTATG CAAAGAATAC GCAGGGAGAA
ACGATTCCTG ACGAATTAAT CCGTGCAGAC ATCAGCACGC AGCAGCCAAT GCGCGCTTTC
AATGAGCGAC ACATTCTGCT GGTGCCGTAT TTTGAATGGC AGCTTTATTC GTGGGACGAT
GAAGCACGTA CGCCGGAAGC GATGACCAAA CTGGCGCGCG ACACCGAACA GCGAATTTTG
GGCATTAGCG GTAGCCCGCG CCCGACACTG GCAATTCCCC ATCTGCTGTC TATGGAATCA
GCGTGCTCTT ATCAGGGCTA TCTGCTGGCG CTGATGGCGG TAGAGCAGAC GCGGAGCTAT
TTCCTGCAAC GCGATGGCTA TCTGACGGAT AACCCAGCTA TCGGCCCCGA TTTAGCGCAG
CACTATTGGT TGCCGGGAAA TAGCGTGAGT CATGACGATA CGTTGCGTAG TCTGACCGGT
GAGGGCTTTA ATCCCGCTTA TCTGGCGCAG GCCTGCAATC TGACGGTCGA TGAAGCCTGG
CAACAGGCGC AGGGCACGAT GACACAGGCT GCTGCGCGTC CTCAGCCTGC TGCGGATTTC
GATTTGTCAG CCCACATTCG CGTGGTCGAT GGTAGCCGCG TGCTGGCGGA TAATGCGCAG
GGCGATGAGA AGATGTGTCA GGATTTTGCG GCGTTTATTG AACGGGAATA CCCACGTTCG
CAGGCATAA
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| Protein sequence | MQQVADYFNA LNRDYLAVHQ AKEELFWQLY MGTGDDEVSE RFSAAESAYK RFISQPRRLA
ELRTQLATLE SSPRDEQQQA LLHGLQGWYR FFDCNVIEDP QAQALMDEII AAESALYAKR
KSYEMTHLDA KGERVSASLG ELLTNQTTND TEAYRQSSQQ ALRDLEQWLL QNGFPELISL
RNRFARQMGY RNYFDYKVNK TERMTPEQLF AILDPFEEQT REANARSLKN LANEKGEDAL
QPWNIRYASA GDVTRQLDPY FPFSASLERW INSFKRLRIG FNGAEMQLDL LVRKGKYENG
FMHGPVPPFV QEGKWLPAQI NFTSLAKPDQ IGSGASGINT LFHEGGHAAH FANIKQNAPC
FSQEFPPTSM AYAETQSMFC DSLLGDADWL KRYAKNTQGE TIPDELIRAD ISTQQPMRAF
NERHILLVPY FEWQLYSWDD EARTPEAMTK LARDTEQRIL GISGSPRPTL AIPHLLSMES
ACSYQGYLLA LMAVEQTRSY FLQRDGYLTD NPAIGPDLAQ HYWLPGNSVS HDDTLRSLTG
EGFNPAYLAQ ACNLTVDEAW QQAQGTMTQA AARPQPAADF DLSAHIRVVD GSRVLADNAQ
GDEKMCQDFA AFIEREYPRS QA
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