| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1572 |
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| Symbol | |
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| ID | 8132513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1826478 |
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| End bp | 1827638 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644864861 |
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| Product | late control D family protein |
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| Protein accession | YP_003017151 |
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| Protein GI | 253687961 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3500] Phage protein D |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.303406 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCGT TAACGGAAGA ACTAACCCTG TCGTCTCCTG CGGTGTCGGA AGTACTGCAA
CCGGCGTTCA CCCTGTGGTA TCAGCAAAAA GACATCACCA ATGATATCGC GCCGTATGTC
ACCAGCGTAA CGTATACCGA TAGCATCAAG AATGAATCGG ATTCGATTGA GATCCGGCTC
GATGATACCG ATGGTCGCTG GATAGATAAG TGGTATCCCG GTACGGGTGA CACGCTGTCG
CTCAAGCTAG GCTATCTCGG TGAAATACTG TTTGACTGCG GTACGTTCTC GATTGATGAG
ATTGAGGTGA GTGCACCGCC TAGCCAAGTG ATGATTCGTG GTGTGGCTAC ATCGGTTAAT
CGCGCATTGC GAACCAAATC AAGCCGCGGT TTTGAAGATA CGACGTTAGC CGCGATTGCG
ACGCGTATCG CGAAAAAGCA TCAGTTGATG CTGGTAGGGA AGATTCAAAT CATCAAGATC
GATCGCGTTA CGCAATATGC GGAAACCGAT GTCGCTTTTC TAAAGCGGCT CGCCAGTGAA
TATGGCTATG TCGTGAAGGT GGTCAGCGAC CAGCTGATTT TTTCCCATCT GGCGACGCTG
CGCAATCAGG CATCTGTTCG ACAAATTAAG CGAACGGACG TCGCGCGTTT TTCACTGAGC
GACACGATCA GCCACGTCTA TAAAAATGCC AAGACGAAGT ATCAGAAAGG GAGTGAAAAG
AAACTGATGG TTTATGAAGC CAACGGTGGC GCGAACAACG AAATGAAGCC TGCCAGCGCT
GAGACCAGTG CGGATACGCT GAAAGTTAAC GTGCGCGCGG CGGATGCTTC TGGAGCAAGG
ATGAAAACGG ATGCCGCATT GGATGCGCAC AACGAAAAGC AACAAAAGGG GTCGATGACG
CTGATGGGCA GCCCGCAGTT GGCGGCGGGA AATAAAGTGG AGCTGGTGTC GTTCGGCCAA
CTTTCTGGCC ATTGGTTGAT CGAATCGGCT CGCCATATTC TGGAACGTGG CAGTGGCTAC
ACCACGGAGA TTGGGTTGAT TCGCGGGCCG ATTACGGCGG GCAAGCGTAA GCAGAACAGC
GGGAAAACGC TGGTGACTTA CCACCCGGAT GGCAGCCAGA CAACGCAGAC GGTCAAGAGT
AAAAAGGAGG TGCTTCCATG A
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| Protein sequence | MAALTEELTL SSPAVSEVLQ PAFTLWYQQK DITNDIAPYV TSVTYTDSIK NESDSIEIRL
DDTDGRWIDK WYPGTGDTLS LKLGYLGEIL FDCGTFSIDE IEVSAPPSQV MIRGVATSVN
RALRTKSSRG FEDTTLAAIA TRIAKKHQLM LVGKIQIIKI DRVTQYAETD VAFLKRLASE
YGYVVKVVSD QLIFSHLATL RNQASVRQIK RTDVARFSLS DTISHVYKNA KTKYQKGSEK
KLMVYEANGG ANNEMKPASA ETSADTLKVN VRAADASGAR MKTDAALDAH NEKQQKGSMT
LMGSPQLAAG NKVELVSFGQ LSGHWLIESA RHILERGSGY TTEIGLIRGP ITAGKRKQNS
GKTLVTYHPD GSQTTQTVKS KKEVLP
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