Gene PC1_1570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1570 
Symbol 
ID8132511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1825359 
End bp1826288 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content51% 
IMG OID644864859 
ProductP2 GpU family protein 
Protein accessionYP_003017149 
Protein GI253687959 
COG category[R] General function prediction only 
COG ID[COG3499] Phage protein U 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.256457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGCGG TATTAGGAAA TATTGAATTT AAAGTGACCG CCTACTGGGA CGGCTTTAAT 
ACGTCATTTG GTGCAGATTA TGCCGAGCAT GGCCGTATTG AAGGTAAACC CGGTCTGCAG
TTCATCGGTG CGAAGCTGGA CGAAATTACT ATTAGTCTGG TGTTTCACAA GCAGTACTGC
ACGCCGGATG TGGAGTTGAA GCGGTTGACT GAGGCGATGC GGGCGCATCA GGCAATGGCG
TTAGTCTTTG GCAATGGGGA TTATCGCGGC TGGTTTGTGA TTACGGCACT GACTTCGACC
AGCGAACATA CCGACGCGAA GGGCAACGTA TTGGCCATGA ATGCCTCGTT AACGCTGCGA
GAATACATTG GCGATCCAAA AAATCCGCTC AAGCCGCCTG CGATAGAGAC GCCTGTTCCT
AATGTTAGCG CCATCACCAA AGCGGTCGAT AAAGTGAGCA ATTTTGCAGC TTCGCTACGC
ACGGCTGTCA CGTATGCCAA GAAGGCGCAT TCTGCCGTTA AGGCGGTGAA AACCACCGTT
CAGATTGTAA AACGGATGAA GAACAATCCC GAAACCGCGC TGCTGCAAAT TCCTGGGCTG
CTAACGCAGG TCGGGAATGT ATTGACGCCG CTAAGTGAGG TGGAGCCGGC GTTTAAAAAA
GCGGCAGAGG CTATTTCTGA TGCAGCGGTT CAGGCCGAGA AGATGACGCC TGAAATTACA
GCGGTTAATA AAGCGGCGAA TGAAATGCTG AAGCAGGTCA AACAAGTTGC CACCTTGTTG
CAGGGTGTCG ACAGCAAAAA CGTTATCGAG AAGCTGGAAG CCATCAGCAA ACATGTTGAT
GCCGCGAGCG ACACATTTAA AGGCGCTGAA CCTGCGCTGA GCAAACTGAC GGCGGAAATC
GTGAAGAGGG TTGAAGCATA TGCACCTTGA
 
Protein sequence
MFAVLGNIEF KVTAYWDGFN TSFGADYAEH GRIEGKPGLQ FIGAKLDEIT ISLVFHKQYC 
TPDVELKRLT EAMRAHQAMA LVFGNGDYRG WFVITALTST SEHTDAKGNV LAMNASLTLR
EYIGDPKNPL KPPAIETPVP NVSAITKAVD KVSNFAASLR TAVTYAKKAH SAVKAVKTTV
QIVKRMKNNP ETALLQIPGL LTQVGNVLTP LSEVEPAFKK AAEAISDAAV QAEKMTPEIT
AVNKAANEML KQVKQVATLL QGVDSKNVIE KLEAISKHVD AASDTFKGAE PALSKLTAEI
VKRVEAYAP