Gene PC1_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1553 
Symbol 
ID8132494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp1810108 
End bp1811538 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content52% 
IMG OID644864842 
ProductSerralysin 
Protein accessionYP_003017132 
Protein GI253687942 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTAC GAGCTCAAGA TAAGGATACC GCAGAATCGG CATTGCATGC AGCGGGAACG 
GGGTATAGCG ATGTGTATGA TCTGTACAAT TACCATTCAC GTGGCGATGG ACAGCTTAAT 
GGCAAACCCT CGTTCACAAG CGATTTGGCA GCGAAGGAAA TTGTCCGCGA CGGTCTGACC 
TGGAATGGAA CGAACGTATT CGGCAAATCC GCTAATCTGA CCTATTCGTT CTTACAGAAC 
GTGCGGTCTA TCCCTTCTGG CGATCAGGGT TTTGTGAAAT TCAGCGCAGC CCAGGAACAA 
CAAGCCAAAC TGTCTCTGCA ATCGTGGTCA GATGTCGCTA ATGTCACGTT TACTCAGGTT 
AGCCCTACCC AAAAAGCCAC CATCACGTTT GGTAACTACA CCCGTGATTC AAGTGGTCGG 
TTGGACTACG ATACTCAGGC CTACGCTTAT ATGCCGGGTA ACCACTCGGC GGCGGGCAGC 
GCCTGGTTTA ACTACAACTC CGACACGGTG CGTAACCCGG CGACGGAATA CGGCAAGCAG 
ACGCTGACGC ATGAGATCGG TCATGCGCTG GGTCTGAATC ACCCAGGTTC CTACAATGCT 
GGCGAAGGTA ACCCAACCTA CCGCGATGTG ACCTATGCGG AAGATACGCG CCAGTTCAGC 
CTGATGAGCT ACTGGAGTGA GCAGAACACC GGGGGAGATT TCCAGGGGCA CTATGCTGCA 
GGTCCGCTGA TTGATGACAT CACGGCCATC CAATATCTTT ACGGTGCAAA CATGAACACG 
CGTACCGGTG ATACGGTATA CGGTTTCAAC TCCAACACCG GCCGTGATTT CTATTCAGCG 
AATAGCAGCA GTGACAAACT GATCTTCTCC GTTTGGGATG CGGGCGGCAC GGATACGTTT 
GATTTCTCTG GCTACAGAAA CGATCAGCGT ATCAACCTGA ATGAAGGTGG ATTCTCTGAT 
GTTGGCGGCC TGAAAGGTAA CGTGTCTATC GCCCACGGCG TGACCATCGA AAACGCCATT 
GGCGGTTCCG GCAACGATAT TATTATCGGC AATGACGCGA ATAATATTCT GAACGGTGGC 
GCAGGTGATG ACGTCATTTA CGGCGGCGGC GGTGCAGATA CGCTGACGGG CGGCGCAGGC 
AAAGATATTT TTGTCTACGC CAGCGCGAGC GATTCTTCCT ATAAGAACGG TTATGACACC 
ATCACGGACT TCCAACGCGG CATCGACAAA ATCGACCTGT CAGCGTTGAA TCAAAATAAA 
GATTTGCAGT TTGTTGATGC GTTCACCGGA CGTGGCAATG AAGCACTGCT TGACTGGGAT 
GCGGGTAGCA ATACCACCAA TCTGTGGCTG AACTTTGCGG GTCAGACCAC ACCAGACTTT 
GTTGTACATA TTGTTGGTCA GCCTTCTGCG GCAACCGATT TTATCGTGTG A
 
Protein sequence
MALRAQDKDT AESALHAAGT GYSDVYDLYN YHSRGDGQLN GKPSFTSDLA AKEIVRDGLT 
WNGTNVFGKS ANLTYSFLQN VRSIPSGDQG FVKFSAAQEQ QAKLSLQSWS DVANVTFTQV 
SPTQKATITF GNYTRDSSGR LDYDTQAYAY MPGNHSAAGS AWFNYNSDTV RNPATEYGKQ 
TLTHEIGHAL GLNHPGSYNA GEGNPTYRDV TYAEDTRQFS LMSYWSEQNT GGDFQGHYAA 
GPLIDDITAI QYLYGANMNT RTGDTVYGFN SNTGRDFYSA NSSSDKLIFS VWDAGGTDTF 
DFSGYRNDQR INLNEGGFSD VGGLKGNVSI AHGVTIENAI GGSGNDIIIG NDANNILNGG 
AGDDVIYGGG GADTLTGGAG KDIFVYASAS DSSYKNGYDT ITDFQRGIDK IDLSALNQNK 
DLQFVDAFTG RGNEALLDWD AGSNTTNLWL NFAGQTTPDF VVHIVGQPSA ATDFIV