| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1544 |
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| Symbol | |
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| ID | 8132485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1798252 |
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| End bp | 1799262 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644864833 |
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| Product | ABC transporter related |
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| Protein accession | YP_003017123 |
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| Protein GI | 253687933 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0675386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACTGG TTATTCAAAA TCTCTATAAA AGCTTTGAGG GTTATGTCGC TCTCGATCGC
ATCAATTTGT CGATCGAAAA TGCCGAATTT GTCTGTCTTC TTGGGCCTAG CGGCTGCGGC
AAAACGACAT TGCTGCGCAT CATTGCCGGA TTACTAAGTT GTGATGGAGG AAAAATCACG
CTGGACGATC GCGATCTGGT TAACGTGCCT GCCAGGGAAA GAGGTTTTGG CATTGTCTTT
CAGTCTTACT CGCTTTTTCC CCACATGACG ATTGCACAAA ATATTGGCTA TGGGCTCAAA
ATTCGCCAGA CGCCTGCCGA GGAAGTTGCC GCACGCGTCA GCGATCTGCT GGATACCGTA
CGCCTTAGTG GATTCGGCGA TCGTTATCCT GCCCAGCTTT CAGGCGGGCA GCAACAGCGT
GTCGCTATCG CACGCGCGCT GGCGGTCAAC CCTTCCCTAC TGTTACTGGA TGAACCTCTT
TCGGCACTGG ATGCGCGCGT GCGCGCCGGA TTGCGTCAGG AATTACGCGA CGTGCAACAG
CGGCTCGGCA TTCCCACTTT GATGGTCACA CATGATCAGG AAGAAGCGAT GAGCATGGCG
GATAAAATCA TTTGCATGCA CGGTGGACGC ATTGTGCAGG AAGGCACGCC GCACGAACTT
TACACCAGCC CACGCACACG TTTCGTTGCC GAATTCATGG GGCACAGCAA TCTGCTGTCA
CGCGATGTCG TCAACACGTG GATGCCGGAA CTGCTCCCCT CTGCACAGGA AACTGCGCTA
CCAGAAGACG CTGAATTGTT TATCCGACCG GAAAGGATTG CACTACATAA AGCGGAAGGC
GCAGAAGGAC GGGTCATCAA CACCAGTTTC CTCGGGAGTA TCCAACGCAT ACAGGTGGTA
TGGAAATCGC AGCCGCTATT AGTCGAGACC AGCAGCGCCG TGAACTGGAA TCCTGGCGAC
CCCATTCATC TATCGATTCG CGCAGAAGAC TGCGCCTGGG TGCAATCATG A
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| Protein sequence | MALVIQNLYK SFEGYVALDR INLSIENAEF VCLLGPSGCG KTTLLRIIAG LLSCDGGKIT
LDDRDLVNVP ARERGFGIVF QSYSLFPHMT IAQNIGYGLK IRQTPAEEVA ARVSDLLDTV
RLSGFGDRYP AQLSGGQQQR VAIARALAVN PSLLLLDEPL SALDARVRAG LRQELRDVQQ
RLGIPTLMVT HDQEEAMSMA DKIICMHGGR IVQEGTPHEL YTSPRTRFVA EFMGHSNLLS
RDVVNTWMPE LLPSAQETAL PEDAELFIRP ERIALHKAEG AEGRVINTSF LGSIQRIQVV
WKSQPLLVET SSAVNWNPGD PIHLSIRAED CAWVQS
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