Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1541 |
Symbol | |
ID | 8132482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 1794980 |
End bp | 1795666 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644864830 |
Product | Glutathione S-transferase domain protein |
Protein accession | YP_003017120 |
Protein GI | 253687930 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.684419 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCAGT TGTATATCGC CAATAAAAAC TATTCGTCCT GGTCACTGCG TCCGTGGGTG CTGTTGAAAA CACTGTCGAT TCCTTTCGAA GAGAAACTGG TTGCTTTTGC ACCGGGCATG GCACAGCCGG CATTTAAGGC CTTTTCGCCG ACGGCAAAAG TCCCCTGCCT GATCGATGGC GAGACCACCG TCTGGGATTC ATTGGCGATT ACCGAGTATC TGGCTGAACA GCATCCCGGC GTCTGGCCTG CCGATGCCAA AAACCGTGCG TGGGCACGCT GCGCTGCCGC CGAAATGCAC TCTGGTTTTA CCGCACTGCG TAACACCTGC TCTATGAGCT GCGGCGTGCG CGTCAAAATG AACGAAATCT CTCCCGCCCT CCGCAACGAC ATTAACCGCA TCGGCGAACT CTGGCAGGAA GGGCTAACGC GCTTTGGTGG ACCGTTTCTG GCAGGAAAAC AATTTTCAGC GGTAGACGCC TTCTTTGCGC CGGTCGTATT CCGCATCAAA ACCTATCAGC TCCCCGTATC GCCGGAAGCC GCTGCCTATT GCGACCACCT GTTAGCCCAA CCCGCGATGC AGCGCTGGCT ACAGGACGCT TTAGCGGAAA CCTGGCGTGA AGATGAGCAT GAAGAAGAAG TGAAAAAAGC GGGAGAAGTG ATAGAAGATC TGCGCGCTCG CGAGTAG
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Protein sequence | MYQLYIANKN YSSWSLRPWV LLKTLSIPFE EKLVAFAPGM AQPAFKAFSP TAKVPCLIDG ETTVWDSLAI TEYLAEQHPG VWPADAKNRA WARCAAAEMH SGFTALRNTC SMSCGVRVKM NEISPALRND INRIGELWQE GLTRFGGPFL AGKQFSAVDA FFAPVVFRIK TYQLPVSPEA AAYCDHLLAQ PAMQRWLQDA LAETWREDEH EEEVKKAGEV IEDLRARE
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