Gene PC1_1540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1540 
SymbolpbpG 
ID8132481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1793962 
End bp1794909 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content53% 
IMG OID644864829 
ProductD-alanyl-D-alanine endopeptidase 
Protein accessionYP_003017119 
Protein GI253687929 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAAA ATTTTAAGCT TTCTCTTTGT GGCCTGTTGA TGCTATCAAC CCATGCTGTG 
ATGTTGCCTC AGGCTATGGC GAAAGCGCCG ACGTATTCCG CCGGCACTGC GCATCAGGAA
ATTGCTTCCG GTAGCGCTAT GGTGGTGGAT TTGCGTGATA ACCACATCCT GTATTCCAGT
AACCCAGATG TGGTGGTACC GATTGCTTCG GTGACGAAAT TGATGACGGC GCTGGTGGTG
CTGGATGCCA ATCAGCCGCT GGATGAAATC ATCTCTGTCG ATATCAGTCA GACGAAAGAA
ATGAAAGGGG TGTACTCGCG TGTTCGTCTG AACAGCGAGA TCAGCCGCCG TGACATGCTG
CTACTGGCGC TGATGTCATC AGAAAACCGC GCGGCGGCCA GTCTGGCGCA CCACTATCCA
GGCGGCTATC AGGCATTTAT CCGTGCGATG AATGCCAAAG CCCGTGCGCT AGGTATGGCT
CACACGCGCT ATGTCGAGCC GACCGGGCTG TCCATCAATA ACGTCTCGAC CGCCCGCGAT
CTCACCAAAC TCCTGATTGC CAGTAAGCAA TATCCGTTGC TGAGCCAGCT GAGTACGACA
CAGGAGAAAA CGGCGACGTT CTCTCATCCG GCGTACAGCC TGCCGTTCAG AAACACGAAC
CATCTGGTCT ATAAAGCCGA CTGGAGCATC CAACTGACCA AAACGGGCTT CACGAATCAG
GCGGGACATT GTCTGGTGAT GCGCACGGTT ATTAACCAGC GGCCTGTTGC GCTGGTGGTG
CTGGATGCAT TCGGTAAATA CACGCACTTT GCGGATGCTA ATCGTCTGCG TAAGTGGATA
GAAACCGGCA AGGTCAGCGA GGTGCCTGCT GCTGCGTTGA GCTATAAGAA GCAAAAATCG
CTGGCTTCTC GTCAACCGCA GAGCATGGCG AGTATCGAAA CCGAATAA
 
Protein sequence
MTKNFKLSLC GLLMLSTHAV MLPQAMAKAP TYSAGTAHQE IASGSAMVVD LRDNHILYSS 
NPDVVVPIAS VTKLMTALVV LDANQPLDEI ISVDISQTKE MKGVYSRVRL NSEISRRDML
LLALMSSENR AAASLAHHYP GGYQAFIRAM NAKARALGMA HTRYVEPTGL SINNVSTARD
LTKLLIASKQ YPLLSQLSTT QEKTATFSHP AYSLPFRNTN HLVYKADWSI QLTKTGFTNQ
AGHCLVMRTV INQRPVALVV LDAFGKYTHF ADANRLRKWI ETGKVSEVPA AALSYKKQKS
LASRQPQSMA SIETE