Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1540 |
Symbol | pbpG |
ID | 8132481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1793962 |
End bp | 1794909 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644864829 |
Product | D-alanyl-D-alanine endopeptidase |
Protein accession | YP_003017119 |
Protein GI | 253687929 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTAAAA ATTTTAAGCT TTCTCTTTGT GGCCTGTTGA TGCTATCAAC CCATGCTGTG ATGTTGCCTC AGGCTATGGC GAAAGCGCCG ACGTATTCCG CCGGCACTGC GCATCAGGAA ATTGCTTCCG GTAGCGCTAT GGTGGTGGAT TTGCGTGATA ACCACATCCT GTATTCCAGT AACCCAGATG TGGTGGTACC GATTGCTTCG GTGACGAAAT TGATGACGGC GCTGGTGGTG CTGGATGCCA ATCAGCCGCT GGATGAAATC ATCTCTGTCG ATATCAGTCA GACGAAAGAA ATGAAAGGGG TGTACTCGCG TGTTCGTCTG AACAGCGAGA TCAGCCGCCG TGACATGCTG CTACTGGCGC TGATGTCATC AGAAAACCGC GCGGCGGCCA GTCTGGCGCA CCACTATCCA GGCGGCTATC AGGCATTTAT CCGTGCGATG AATGCCAAAG CCCGTGCGCT AGGTATGGCT CACACGCGCT ATGTCGAGCC GACCGGGCTG TCCATCAATA ACGTCTCGAC CGCCCGCGAT CTCACCAAAC TCCTGATTGC CAGTAAGCAA TATCCGTTGC TGAGCCAGCT GAGTACGACA CAGGAGAAAA CGGCGACGTT CTCTCATCCG GCGTACAGCC TGCCGTTCAG AAACACGAAC CATCTGGTCT ATAAAGCCGA CTGGAGCATC CAACTGACCA AAACGGGCTT CACGAATCAG GCGGGACATT GTCTGGTGAT GCGCACGGTT ATTAACCAGC GGCCTGTTGC GCTGGTGGTG CTGGATGCAT TCGGTAAATA CACGCACTTT GCGGATGCTA ATCGTCTGCG TAAGTGGATA GAAACCGGCA AGGTCAGCGA GGTGCCTGCT GCTGCGTTGA GCTATAAGAA GCAAAAATCG CTGGCTTCTC GTCAACCGCA GAGCATGGCG AGTATCGAAA CCGAATAA
|
Protein sequence | MTKNFKLSLC GLLMLSTHAV MLPQAMAKAP TYSAGTAHQE IASGSAMVVD LRDNHILYSS NPDVVVPIAS VTKLMTALVV LDANQPLDEI ISVDISQTKE MKGVYSRVRL NSEISRRDML LLALMSSENR AAASLAHHYP GGYQAFIRAM NAKARALGMA HTRYVEPTGL SINNVSTARD LTKLLIASKQ YPLLSQLSTT QEKTATFSHP AYSLPFRNTN HLVYKADWSI QLTKTGFTNQ AGHCLVMRTV INQRPVALVV LDAFGKYTHF ADANRLRKWI ETGKVSEVPA AALSYKKQKS LASRQPQSMA SIETE
|
| |