Gene PC1_1532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1532 
Symbol 
ID8132473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp1786987 
End bp1787658 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content52% 
IMG OID644864821 
Producthypothetical protein 
Protein accessionYP_003017111 
Protein GI253687921 
COG category[S] Function unknown 
COG ID[COG1636] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAATG TCAAAACCGC CGCGCTGCAA CGTCCACAGC TTTCTCTGCC GAATAACGCC 
GACAAGCTGC TGCTGCACTC CTGCTGTGCG CCCTGCTCTG GTGAAGTCAT GGAAGCCATC 
ACCGCTTCTG GCATCGACTA CACCATTTTC TTTTATAACC CCAACATCCA CCCGCAGCGT 
GAATACCTGA TCCGTAAAGA GGAAAATATC CGCTTCGCCG AACAGCATAA CGTGCCTTTC 
ATCGATGCGG ATTACGACAC GGACAACTGG TTTGAGCGCG CCAAAGGCAT GGAATGGGAG 
CCCGAACGCG GCATTCGCTG CACCATGTGT TTTGATATGC GTTTCGAGCG CACGGCGCTA 
TATGCCGCAG AAAACGGCTT TAGCGTTATC TCCAGTTCAT TGGGGATTTC CCGCTGGAAA 
AACATGCAGC AAATTAACGA ATGTGGTCAG AACGCCGCAC AGAAATATCC CGGCATCACC 
TATTGGGACT ACAACTGGCG TAAAGGCGGC GGCTCGTCGC GTATGATCGA AATCAGCAAG 
CGCGAACGTT TCTATCAACA GGAGTATTGC GGCTGCATTT ATTCCCTGCG CGATTCCAAT 
AAGCATCGCA AATCACAGGG GCGCGATATT ATCCGCATCG GTAAACTGTA TTACGGCGAC 
GATACCGAAT AA
 
Protein sequence
MSNVKTAALQ RPQLSLPNNA DKLLLHSCCA PCSGEVMEAI TASGIDYTIF FYNPNIHPQR 
EYLIRKEENI RFAEQHNVPF IDADYDTDNW FERAKGMEWE PERGIRCTMC FDMRFERTAL 
YAAENGFSVI SSSLGISRWK NMQQINECGQ NAAQKYPGIT YWDYNWRKGG GSSRMIEISK 
RERFYQQEYC GCIYSLRDSN KHRKSQGRDI IRIGKLYYGD DTE