Gene PC1_1518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1518 
Symbol 
ID8132459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1769052 
End bp1770188 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content54% 
IMG OID644864807 
ProductABC-2 type transporter 
Protein accessionYP_003017097 
Protein GI253687907 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCATC GTCTGTGGAC GTTGATTATT AAGGAACTAC AATCGCTGCT GCGCGATCCG 
CAAACGCGTT CCATTCTGGT GTTGCCCGTT ATCCTTCAAG TTTCCCTGTT TCCTTTCGCC
GCGACGCTCG ACGTGACCAA CGCGACCATT GCCATTTACA GCGAAGATAA CGGCCCTCAT
GCGATTGAGT TGACACAGCG CTTTGCCAAG GCGAAGTCCT TTTCTCATGT GTTGATGCTG
CATAGCCCGC AGGACGTGGC ACCGACGCTG GATAATCAGC GTGCGCTTCT CATTCTGCGC
TTCCCGCCGC AGTTCTCGCG TGATATCGCC AGCGGAAATA GCACCTCGAT TCAGTTGATT
CTGGATGGCA GACGCTCTAA CAGCGCGCAG ATCGCCGCTA ACGATGTACA GCACATCGTG
CGCGATTATC AGTTGGCATT GCTGGCGGCC AGACCCGCTC AAAACGGCGC GAATCAGAGC
ACTTCCAATC CAAACAACAG CGAGCTGGTG GTTCGCCACT GGTATAACCC GAATCTGGAC
TACAAATGGT TTGTGGTGCC GTCGCTGATT GCCATGATTG CCACTATCGG CGTACTGATT
GTCACAGCAC TCTCCGTGGC ACGCGAGCGG GAACAAGGCA CGCTGGAACA ACTGCTGGTT
TCGCCGCTGT CCACCAGCCA AATTTTCATT GGCAAAGCCG TACCTGCGCT GATCGTCGCC
ACGTTTCAAG CCACGATCGT GCTACTGGCG GGCATCCTGA TTTACCATAT CCCTTTCGCC
GGATCGCTAC TGCTGTTTTA CACTACGATG CTGATCTACG GCCTATCGCT GGTGGGCTTT
GGCCTGCTGA TATCCTCGCT CTGTGCCACA CAGCAGCAGG CATTCATCGG CGTGTTCGTC
TTCCTGATGC CCGCGATTCT GCTTTCTGGC TATGTGTCAC CGGTTGAAAA TATGCCGATC
TGGTTGCAGC ACATCACCTG GATTAACCCG ATCCGTCACT TCACCGATAT AACGAAGCAG
ATTTACCTCA AGGACGCGGA TTTCAGCATT ATCTGGAGCA GCCTGTGGCC GCTGTTCATC
ATCACACTCA CCACCGGCTC GGCGGCGTAT GCCATTTTCC GACGGAATAT CGCGTAG
 
Protein sequence
MLHRLWTLII KELQSLLRDP QTRSILVLPV ILQVSLFPFA ATLDVTNATI AIYSEDNGPH 
AIELTQRFAK AKSFSHVLML HSPQDVAPTL DNQRALLILR FPPQFSRDIA SGNSTSIQLI
LDGRRSNSAQ IAANDVQHIV RDYQLALLAA RPAQNGANQS TSNPNNSELV VRHWYNPNLD
YKWFVVPSLI AMIATIGVLI VTALSVARER EQGTLEQLLV SPLSTSQIFI GKAVPALIVA
TFQATIVLLA GILIYHIPFA GSLLLFYTTM LIYGLSLVGF GLLISSLCAT QQQAFIGVFV
FLMPAILLSG YVSPVENMPI WLQHITWINP IRHFTDITKQ IYLKDADFSI IWSSLWPLFI
ITLTTGSAAY AIFRRNIA