Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1518 |
Symbol | |
ID | 8132459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 1769052 |
End bp | 1770188 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644864807 |
Product | ABC-2 type transporter |
Protein accession | YP_003017097 |
Protein GI | 253687907 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCATC GTCTGTGGAC GTTGATTATT AAGGAACTAC AATCGCTGCT GCGCGATCCG CAAACGCGTT CCATTCTGGT GTTGCCCGTT ATCCTTCAAG TTTCCCTGTT TCCTTTCGCC GCGACGCTCG ACGTGACCAA CGCGACCATT GCCATTTACA GCGAAGATAA CGGCCCTCAT GCGATTGAGT TGACACAGCG CTTTGCCAAG GCGAAGTCCT TTTCTCATGT GTTGATGCTG CATAGCCCGC AGGACGTGGC ACCGACGCTG GATAATCAGC GTGCGCTTCT CATTCTGCGC TTCCCGCCGC AGTTCTCGCG TGATATCGCC AGCGGAAATA GCACCTCGAT TCAGTTGATT CTGGATGGCA GACGCTCTAA CAGCGCGCAG ATCGCCGCTA ACGATGTACA GCACATCGTG CGCGATTATC AGTTGGCATT GCTGGCGGCC AGACCCGCTC AAAACGGCGC GAATCAGAGC ACTTCCAATC CAAACAACAG CGAGCTGGTG GTTCGCCACT GGTATAACCC GAATCTGGAC TACAAATGGT TTGTGGTGCC GTCGCTGATT GCCATGATTG CCACTATCGG CGTACTGATT GTCACAGCAC TCTCCGTGGC ACGCGAGCGG GAACAAGGCA CGCTGGAACA ACTGCTGGTT TCGCCGCTGT CCACCAGCCA AATTTTCATT GGCAAAGCCG TACCTGCGCT GATCGTCGCC ACGTTTCAAG CCACGATCGT GCTACTGGCG GGCATCCTGA TTTACCATAT CCCTTTCGCC GGATCGCTAC TGCTGTTTTA CACTACGATG CTGATCTACG GCCTATCGCT GGTGGGCTTT GGCCTGCTGA TATCCTCGCT CTGTGCCACA CAGCAGCAGG CATTCATCGG CGTGTTCGTC TTCCTGATGC CCGCGATTCT GCTTTCTGGC TATGTGTCAC CGGTTGAAAA TATGCCGATC TGGTTGCAGC ACATCACCTG GATTAACCCG ATCCGTCACT TCACCGATAT AACGAAGCAG ATTTACCTCA AGGACGCGGA TTTCAGCATT ATCTGGAGCA GCCTGTGGCC GCTGTTCATC ATCACACTCA CCACCGGCTC GGCGGCGTAT GCCATTTTCC GACGGAATAT CGCGTAG
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Protein sequence | MLHRLWTLII KELQSLLRDP QTRSILVLPV ILQVSLFPFA ATLDVTNATI AIYSEDNGPH AIELTQRFAK AKSFSHVLML HSPQDVAPTL DNQRALLILR FPPQFSRDIA SGNSTSIQLI LDGRRSNSAQ IAANDVQHIV RDYQLALLAA RPAQNGANQS TSNPNNSELV VRHWYNPNLD YKWFVVPSLI AMIATIGVLI VTALSVARER EQGTLEQLLV SPLSTSQIFI GKAVPALIVA TFQATIVLLA GILIYHIPFA GSLLLFYTTM LIYGLSLVGF GLLISSLCAT QQQAFIGVFV FLMPAILLSG YVSPVENMPI WLQHITWINP IRHFTDITKQ IYLKDADFSI IWSSLWPLFI ITLTTGSAAY AIFRRNIA
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