| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1509 |
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| Symbol | |
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| ID | 8132450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1761583 |
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| End bp | 1763595 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644864798 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_003017088 |
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| Protein GI | 253687898 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00045733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAG TATTTACACT GAATTCCGAC TTTAAACCGG CAGGCGATCA GCCTGAGGCC
ATTCGTCGTT TAAAAGAGGG CCTGGAAGAC GGGTTAGCGC ATCAAACGCT GCTCGGGGTA
ACCGGTTCAG GTAAGACGTT CACGATCGCC AACGTGATTG CCGATCTCAA TCGGCCGACA
ATGATGCTGG CGCCAAATAA AACGCTGGCG GCTCAGTTGT ACGGCGAAAT GAAAGAATTC
TTTCCTGATA ATGCCGTCGA ATACTTCGTT TCGTACTACG ACTATTATCA GCCGGAAGCC
TACGTTCCGA GTTCGGACAC CTTCATTGAA AAAGATGCAT CGGTTAACGA ACATATCGAA
CAGATGCGTC TTTCCGCGAC AAAAGCGCTG TTGGAACGGC GTGATGTGAT CGTCGTGGCC
TCAGTGTCCG CTATCTATGG TCTGGGCGAT CCCGATTTAT ATCTGAAAAT GATGCTGCAC
CTGACGCAGG GGATGCTGAT TGACCAGCGT GCTATTTTGC GGCGTTTGGC TGAGTTGCAG
TATTCCCGCA ACGATCAGGC GTTTCAGCGC GGTACCTTCC GCGTGCGCGG TGAGGTGATT
GATATTTTCC CTGCGGAATC TGACGAAATC GCGCTGCGTG TTGAACTGTT TGATGAAGAA
GTGGAACGAT TGTCGCTGTT TGACCCGCTG ACGGGTCATG TCCTTCAGAC GGTGCCGCGC
TATACCATCT ATCCAAAAAC GCACTACGTC ACGCCGCGTG AACGTATTTT GCAGGCAATG
GAAGACATCA AGGTGGAGCT GGCCGATCGC AGAAAGGTAC TGCTGGCGAA TGATAAGCTG
GTGGAAGAGC AGCGGTTGAG CCAGCGCACG CAGTTTGATC TGGAGATGAT GAACGAGCTG
GGCTATTGCT CCGGGATCGA AAACTACTCA CGCTATCTTT CCGGGCGTGG CCCCGGCGAG
CCGCCGCCGA CGCTGTTTGA CTATTTACCG GCGGACGGAC TGCTGGTCAT TGACGAATCC
CACGTTACCG TGCCCCAGAT CGGTGGTATG TATCGCGGTG ACCGCGCGCG TAAAGAGACG
CTGGTCGAAT ATGGTTTCCG GCTACCTTCG GCGCTGGATA ACCGCCCGAT GAAATTTGAA
GAATTCGAAG CGCTGGCGCC GCAGACGATC TATGTCTCCG CGACGCCGGG TAACTATGAG
CTGGAAAAAT CGGGTGGTGA AGTGATCGAT CAGGTGGTGC GTCCTACTGG GCTGCTCGAT
CCGCTCATTG AAGTGCGGCC TGTGGCGACG CAAGTGGACG ACCTGCTTTC CGAGATTCGC
CAGCGTGCGG CGGTTAACGA ACGTGTGCTG GTCACTACGT TGACCAAACG AATGGCGGAA
GACCTAACGG AATATCTGGA AGAACACGGT GAGCGCGTAC GTTATCTGCA CTCGGATATT
GATACCGTCG AACGTGTTGA AATTATCCGC GATTTACGCC TTGGTGAGTT TGACGTGCTA
GTGGGGATCA ACCTGTTGCG TGAAGGGCTG GATATGCCAG AAGTGTCGCT GGTGGCGATT
CTGGATGCGG ATAAAGAGGG CTTCCTGCGC TCAGAGCGTT CTCTGATTCA GACGATTGGT
CGTGCAGCGC GTAACCTGCG CGGTAAGGCG ATTCTGTACG GCGACAAGAT TACGCCATCC
ATGGCGAAGG CGATTGGCGA AACGGAACGC CGTCGTGAGA AGCAGGAGGC GTACAACACC
GAACACGGGA TTGTGCCGCA GGGGCTCAAT AAGAAAATTT CCGATATTCT GCAATTGGGT
CAACCCACAA ACAGAGGCAA AGGGCGAGGC AACCGTAAAG CGGCAGAACC GGCTGCACGT
TATGAGCTTA TGACGCCGAA AGCGCTGGAG CTGAAAATCC GCGAGCTGGA AAGCAAAATG
CTGACGCATG CGCAGAATCT TGAGTTCGAA GAAGCTGCCG CCTTGCGCGA TGAGTTACAG
GCACTGCGCG CACAATTTAT CGCTGCATCC TAA
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| Protein sequence | MSKVFTLNSD FKPAGDQPEA IRRLKEGLED GLAHQTLLGV TGSGKTFTIA NVIADLNRPT
MMLAPNKTLA AQLYGEMKEF FPDNAVEYFV SYYDYYQPEA YVPSSDTFIE KDASVNEHIE
QMRLSATKAL LERRDVIVVA SVSAIYGLGD PDLYLKMMLH LTQGMLIDQR AILRRLAELQ
YSRNDQAFQR GTFRVRGEVI DIFPAESDEI ALRVELFDEE VERLSLFDPL TGHVLQTVPR
YTIYPKTHYV TPRERILQAM EDIKVELADR RKVLLANDKL VEEQRLSQRT QFDLEMMNEL
GYCSGIENYS RYLSGRGPGE PPPTLFDYLP ADGLLVIDES HVTVPQIGGM YRGDRARKET
LVEYGFRLPS ALDNRPMKFE EFEALAPQTI YVSATPGNYE LEKSGGEVID QVVRPTGLLD
PLIEVRPVAT QVDDLLSEIR QRAAVNERVL VTTLTKRMAE DLTEYLEEHG ERVRYLHSDI
DTVERVEIIR DLRLGEFDVL VGINLLREGL DMPEVSLVAI LDADKEGFLR SERSLIQTIG
RAARNLRGKA ILYGDKITPS MAKAIGETER RREKQEAYNT EHGIVPQGLN KKISDILQLG
QPTNRGKGRG NRKAAEPAAR YELMTPKALE LKIRELESKM LTHAQNLEFE EAAALRDELQ
ALRAQFIAAS
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