| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1495 |
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| Symbol | |
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| ID | 8132436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1745991 |
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| End bp | 1746881 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644864785 |
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| Product | cytidine deaminase |
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| Protein accession | YP_003017075 |
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| Protein GI | 253687885 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0295] Cytidine deaminase |
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| TIGRFAM ID | [TIGR01355] cytidine deaminase, homodimeric |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCCAC GATTTGAAAA CGCCTTTCGG CAATTACCTG CCAGTCTGCA AGCCGCGCTC
CGTCCATTAA TCGATAAGCC GGATTTCGCC GCGATGCTCA CCGCGGACGA TGTGAACGCC
GTCTGTGAAG CCAGTCAGTT AGACGCCGAT GCATTGGCCT TTGCGCTATT GCCGCTGGCA
GCCGCCTGCG CACAAGCGCC TATCTCTAAT TTTCAGGTTG GCGCGATTGC ACAAGGGCTC
AGCGGCAATT TCTACTTTGG TGCCAACATG GAGTTTAGTG CCGTTCAGCT TCAGCAAACG
GTGCATGCCG AACAAAGCGC CGTCAGCCAT GCCTGGATGC GCAATGAACG TGGATTGCGA
GCCGTAACCG TAAACTACAC ACCATGCGGC CATTGTCGCC AGTTCATGAA CGAATTACGC
GATGCGGCGT CGCTGCGGAT TCAACTACCG GGTCGCCAGC CTGCCACGCT CAGCCACTAT
CTGCCAGATT CCTTTGGCCC CGTCGATCTG CAAATCGATA CTTTGCTGAT GGATGACATC
AACCACGGCG CCACTTTGCA GAATATGAAT GCGCTTGCGC GTCAGGCGCT GGATGCCGCC
AACCGCAGCC ATGCCCCCTA TAGCAAAGCG ATTAGCGGCA TTGTGCTGGA AACCTCAAGT
GGCAACACCT ATACCGGGCG CTACGCAGAA AATGCGGCGT TCAACCCTAG CCTGCCACCT
TTGCAAACTG CGTTAAATCT GATGAATCTT GCTGGCGAAG ATCTGTCCAC GGTGAAACAT
GCCGTTGTTG TTGAACGTCG CAATGCGGTT GTCAGCCACT GGGCCATTTC GCAAATTATG
CTGGCCGAAT TGGGCTGCAC TGACGTTGAA CATCACTTTA TTGAGGAATA G
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| Protein sequence | MHPRFENAFR QLPASLQAAL RPLIDKPDFA AMLTADDVNA VCEASQLDAD ALAFALLPLA
AACAQAPISN FQVGAIAQGL SGNFYFGANM EFSAVQLQQT VHAEQSAVSH AWMRNERGLR
AVTVNYTPCG HCRQFMNELR DAASLRIQLP GRQPATLSHY LPDSFGPVDL QIDTLLMDDI
NHGATLQNMN ALARQALDAA NRSHAPYSKA ISGIVLETSS GNTYTGRYAE NAAFNPSLPP
LQTALNLMNL AGEDLSTVKH AVVVERRNAV VSHWAISQIM LAELGCTDVE HHFIEE
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