| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1494 |
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| Symbol | |
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| ID | 8132435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1744084 |
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| End bp | 1745781 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644864784 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_003017074 |
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| Protein GI | 253687884 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTAG AATACGAAAG CAAACGTCCT CTCCATATTC CCTACGCTGG CCCAATCTTG
CTCGAATTTC CTCTGCTGAA TAAAGGCAGC GCGTTTACCG AAGAAGAACG CGCTAACTTT
AACCTGCATG GTCTGCTGCC TGAAGCCGTC GAAACCATCG AAGAACAGGC AGAACGCGCC
TGGCGTCAGT ATCAGGAATT CAAACACGAT ATTGAAAAAC ACGTTTACCT GCGCAACATC
CAGGATACCA ACGAAACCCT GTTCTACCGC CTGTTGGACG GTCACCTCAG TGAGATGATG
CCCATCATCT ACACCCCGAC CGTTGGCGAA GCCTGTGAGC ACTTCTCCGA TATCTATCGC
CGCGCCCGTG GCCTGTTTAT CTCCTACCCT AACCGCGCAC ATATCGACGA TATGCTGCAA
AACGCCACCA AACAGAACGT GAAAGTCATC GTTGTGACCG ACGGTGAGCG TATTCTGGGT
CTGGGTGACC AAGGTATCGG CGGCATGGGG ATTCCAATCG GTAAGCTGTC GCTGTACACC
GCGTGCGGCG GTATCAGCCC AGCCTACACC CTGCCAGTCG TTCTGGATGT CGGCACCAAC
AACCCACAGC GTCTGAACGA TCCGCTGTAT ATGGGCTGGC GTCATCCGCG TATCACGGAT
GACGAATACT ATGAATTTGT TGACGAATTC ATTCAGGCTG TGAAGCGCCG CTGGCCGAAT
GTGCTGTTGC AATTTGAAGA CTTCGCACAG AAAAACGCGA CGCCGCTGCT GAACCGCTAT
CGTGATGAAA TCTGTAGCTT TAACGATGAC ATTCAGGGCA CCGCTGCGGT TGCACTGGGT
AGTCTGATTG CTGCCAGCCG TGCGGCAGGT ACGCAGTTAC GCGATCAAAC CGTGGCCTTC
CTGGGCGCTG GTTCTGCAGG TTGCGGTATC GCTGAACAAA TCATCGCACA GATGAAATCC
GAAGGGCTAA GCGATGAAGA AGCGCGCGCA CGCGTCTTCA TGGTTGACCG TTTCGGTCTG
CTGACGGACA AACTGCCGAA CCTGCTCGAT TTCCAGAGCA AGCTGGTGCA GAAAAGCGAA
CTGCTGGCTA ACTGGGATTG CAACAGCGAT GCCATTTCAC TGCTGGAAGT CGTACGCAAT
GCCAAGCCGA CCATTCTGAT CGGTGTATCC GGCCAGCCAG GTCTGTTCAC GGAAGAAATT
ATCCGTGAAA TGCACAAACA CTGTGCTCGT CCTATCGTGA TGCCGCTGTC TAACCCGACA
TCCCGCGTGG AAGCCCGTCC GGAAGACATC ATTCGCTGGA CGGAAGGCGC GGCGCTGGTT
GCGACCGGTA GCCCGTTCTC CCCAGTGAAC TATCAGGATA AGGTCTTCCC TATCGCACAG
TGCAACAACT CCTACATTTT CCCAGGTATC GGGTTAGGGG TACTGGCATC AGGTGCCAAG
CGTATCACTG ACGGTATGTT GATGGCCGCC AGCCGCGCAC TGGCTGACTG CTCACCGCTG
GCAAATAACG GTGAAGGCGC TCTGCTGCCG GATCTGGCTG ATATCCAGCA GGTGTCTAAG
CGTATTGCAT TGGAAGTGGG TAAAGCCGCA CAGCTGCAGG GTGCCGCCGT GGTGACCTCG
TCGGATGCGC TGCAAAAGGC GATTGAGCAC AACTTCTGGC AGCCGCAGTA CCGTAGCTAC
AAACGCACGT CGTTCTAA
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| Protein sequence | MELEYESKRP LHIPYAGPIL LEFPLLNKGS AFTEEERANF NLHGLLPEAV ETIEEQAERA
WRQYQEFKHD IEKHVYLRNI QDTNETLFYR LLDGHLSEMM PIIYTPTVGE ACEHFSDIYR
RARGLFISYP NRAHIDDMLQ NATKQNVKVI VVTDGERILG LGDQGIGGMG IPIGKLSLYT
ACGGISPAYT LPVVLDVGTN NPQRLNDPLY MGWRHPRITD DEYYEFVDEF IQAVKRRWPN
VLLQFEDFAQ KNATPLLNRY RDEICSFNDD IQGTAAVALG SLIAASRAAG TQLRDQTVAF
LGAGSAGCGI AEQIIAQMKS EGLSDEEARA RVFMVDRFGL LTDKLPNLLD FQSKLVQKSE
LLANWDCNSD AISLLEVVRN AKPTILIGVS GQPGLFTEEI IREMHKHCAR PIVMPLSNPT
SRVEARPEDI IRWTEGAALV ATGSPFSPVN YQDKVFPIAQ CNNSYIFPGI GLGVLASGAK
RITDGMLMAA SRALADCSPL ANNGEGALLP DLADIQQVSK RIALEVGKAA QLQGAAVVTS
SDALQKAIEH NFWQPQYRSY KRTSF
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