| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1490 |
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| Symbol | |
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| ID | 8132431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1738615 |
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| End bp | 1740516 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644864780 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_003017070 |
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| Protein GI | 253687880 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.281538 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCCCA CACAGGATCA TTATGCTTTG CTGTCTTCCC CTATTCCGGG GCTTGTATTG
CCTGAAACAC GGGTGGTGGA AGTCCGCAAC CTGAGTGTGT ACTTCGAACT GCAGGGGCAG
CGGACGGACG CGGTGCGTAA TTTAACGTTC TCTGTCGATC GGGGTGAAAC GCTGGCCATC
GTTGGGGAAT CGGGGTCGGG TAAGTCAGTG ACGTCGCTGG CTCTGATGCG ACTGGTTGAA
CATGCGGGCG GCGTGATTCA TCGGGGCGAT ATGCTATTCC GCCGTCGCGA TGGGCAAGTG
CTGGATCTCC GCGGAGCGCG TCAGCGGATG ATGCGCACAT TGCGTGGTGC TGATTTGGCG
ATGATTTTTC AGGAGCCAAT GACGTCGCTG AATCCCGTTT TTCCCGTCGG CGAACAAATA
GCGGAGTCGA TTCGTTTGCA TCAGGGAATG GACAGACGCG CCGCGCGTAC AGAAACGTTA
CGCATGCTGG ATCTGGTCAG AATACCGGAA GCACGCAACG TGTTGGATCG CTATCCGCAC
CAGCTGTCCG GCGGTATGCG CCAGCGGGTG ATGATTGCGA TGGCGCTCTC CTGCAAGCCG
TCGCTGCTGA TTGCCGATGA GCCGACAACT GCGCTGGATG TCACTATTCA GGCGCAAATT
CTGCAACTGA TTCGTGTGCT ACAGCGTGAA ATGGCAATGG CCGTGATTTT CATCACCCAT
GACATGGGCG TGGTGGCGGA AGTGGCTGAA CGCGTATTGG TTATGCACCG TGGAGAAAGC
GTTGAAGCGG GGAGCGTTGG GCAGATCTTC ACTGCGCCGC AGCATCCGTA TACGCAGGGG
CTGTTGGCCG CGGTACCCGC GTTAGGGTCA ATGCGCGGCC AACCGTTCCC GGAAAAATTT
CCGCTGCTGG ATCACAACGC TGTACGCATC GCGGACAACG TTCCGCAGGA TACCGTTCCC
GTACAGACGG AGCCGATCTT ACAGGTTCGC AATCTGGTGA CGCGTTTTCC TATTCGCAGC
GGTTTATTGA ACCGCGTAAC CCGGCAGGTG CACGCAGTGG AAAACGTCAG CTTCGATCTC
TGGCCGGGCG AAACGCTTTC GCTGGTTGGC GAATCAGGAT GCGGCAAATC CACGACCGGC
CGCGCGTTGC TCCAACTGGT TGAAAGCCAG AAGGGCGACA TTATCTTTAA TGGTCAGCGC
ATCCATCAGT TAAAAGGAGC GGCGTTACAG CATCTGCGGC GTGATATTCA GCTGATTTTT
CAGGATCCGT ATGCGTCACT GGATCCTCGC CTGACGGTCG GGTTCTCGAT TATGGAACCG
CTGCTGGTAC ACAACATCTG CCGTCGGCAG GAGGCGGAGA AGCGCGTGGA GTGGCTGCTG
TCACGCGTGG GATTGGAGCC GGAACACGCC CGGCGTTACC CGCATGAGTT TTCTGGCGGC
CAGCGCCAGC GCATTTGTAT CGCCAGAGCG CTGGCGCTGA ACCCGAAAGT GGTGATTGCG
GATGAAGCGG TATCCGCGCT GGACGTGTCG ATTCAGGCAC AAATCATCAA TCTGATGCTG
GAACTGCAAC GTGAGTTCGG CATCGCGTTT TTGTTTATTT CACATGATAT GGCGGTGGTC
GAGCGCATCA GCCATCGTGT GGCGGTGATG TACATGGGGC AGATTGTCGA GATTGGCTCA
CGGCAAGACG TATTCGAGCG GCCTCGGCAT CCTTATACCC GCAAGCTGAT GTCGGCAGTA
CCGATTGCCG ATCCCTCATG CCGACAGCGT GAACAAGTGC TGCTGGTTGA TGAAATACCC
AGCCCGATTC GGGCGCTTGG CGACGAACCA AGCACGGCAC CTCTGGTGCA GGTGGGTGAG
CGACACTTTG TTGCGCGCCA TCCGATAGCC GGCGCTTATT GA
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| Protein sequence | MSPTQDHYAL LSSPIPGLVL PETRVVEVRN LSVYFELQGQ RTDAVRNLTF SVDRGETLAI
VGESGSGKSV TSLALMRLVE HAGGVIHRGD MLFRRRDGQV LDLRGARQRM MRTLRGADLA
MIFQEPMTSL NPVFPVGEQI AESIRLHQGM DRRAARTETL RMLDLVRIPE ARNVLDRYPH
QLSGGMRQRV MIAMALSCKP SLLIADEPTT ALDVTIQAQI LQLIRVLQRE MAMAVIFITH
DMGVVAEVAE RVLVMHRGES VEAGSVGQIF TAPQHPYTQG LLAAVPALGS MRGQPFPEKF
PLLDHNAVRI ADNVPQDTVP VQTEPILQVR NLVTRFPIRS GLLNRVTRQV HAVENVSFDL
WPGETLSLVG ESGCGKSTTG RALLQLVESQ KGDIIFNGQR IHQLKGAALQ HLRRDIQLIF
QDPYASLDPR LTVGFSIMEP LLVHNICRRQ EAEKRVEWLL SRVGLEPEHA RRYPHEFSGG
QRQRICIARA LALNPKVVIA DEAVSALDVS IQAQIINLML ELQREFGIAF LFISHDMAVV
ERISHRVAVM YMGQIVEIGS RQDVFERPRH PYTRKLMSAV PIADPSCRQR EQVLLVDEIP
SPIRALGDEP STAPLVQVGE RHFVARHPIA GAY
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