Gene PC1_1487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1487 
Symbol 
ID8132428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp1735165 
End bp1735764 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content48% 
IMG OID644864777 
Productnitroreductase 
Protein accessionYP_003017067 
Protein GI253687877 
COG category[R] General function prediction only 
COG ID[COG3560] Predicted oxidoreductase related to nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAATG CTTTTTTGCA GTCAATCAAG GCCCGTCGTT CAATCTATGC CATCGGCAAT 
AAATTACCGA TATCAGAAGA TCAGGTTACC GCCCTCATTA CCGAAGCCGT TAATGAAAGC 
CCCTCCTCTT TTAATTCACA AAGCTCACGC GTTGTGATTC TGTTCGGCGA GCAGCATCAC 
AAACTGTGGG ATATTGTTAA GCAGCAGTTG AAGAAAATTG TGCCTGCGGA CGCCTTTGCT 
CCGACAGAAA ATAAACTGGC CTCCTTTGCC GCTGGTGCGG GTACCATTCT GTTCTTTGAA 
GACACTGCGG TGATTGAAGC GCTACAGGAA AAATTCGCTC TTTATGCCGA TAACTTCCCG 
GTCTGGTCTG AACATTCAAC CGGTATCGCC CAGTTTGCCG TGTGGTCTAC GCTAGCGCAG 
GAAAAAATTG GCGCTTCGCT CCAGCATTAC AATCCGCTGA TTGATGATGA TGTTAAAGCA 
CAGTGGAACC TGCCAGCCAG TTGGAAACTG CGTGCTCAAA TGCCATTTGG CTCCATCGAG 
CAACCCGCCG GTGAGAAAAC CTATATTTCC TTTGAAGAGC GTTTCCGCGT ATTTAAGTAA
 
Protein sequence
MSNAFLQSIK ARRSIYAIGN KLPISEDQVT ALITEAVNES PSSFNSQSSR VVILFGEQHH 
KLWDIVKQQL KKIVPADAFA PTENKLASFA AGAGTILFFE DTAVIEALQE KFALYADNFP 
VWSEHSTGIA QFAVWSTLAQ EKIGASLQHY NPLIDDDVKA QWNLPASWKL RAQMPFGSIE 
QPAGEKTYIS FEERFRVFK