| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1484 |
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| Symbol | |
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| ID | 8132425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1731575 |
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| End bp | 1732309 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644864774 |
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| Product | transcriptional regulator, GntR family |
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| Protein accession | YP_003017064 |
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| Protein GI | 253687874 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.60959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGAAC CCTTGTATAA GCGCATTGCC CGTGAACTCA GCCAGAATAT TACGCTAGGC
CGCTATCCTG CGGGTTCGTT GCTCCCCTCC GAGCTGGAGC TCTGTGAGCA ATATCAGGTG
AGTCGTCATA CCGTAAGGGA GGCACTGCGC GATCTGACAG AAGCGGGTTT GGTCTCCCGT
CGCAAGGGCG TGGGTTCCGT CGTTGTCGAT AACGATGAAA AGTGCGAACG CAATCACCCT
CTGGCCAGCC TTGAAGATCT GTTTGTGCTG GCAAAGAACA ACCTGCGCGT AGTGAAGAAG
ATTGATGAAG TCGTTGCGGA TGTTGAACTG GCGAAGATTA TCGGTGGCAA GCCGGGCGAT
CGCTGGCTGC ATATTGCCAG CATTCGTGAA GACAGCGAGA AAAAAGACGC CCCGATATGC
TGGACCGATA GCTACGTTAG CCCGGATTAT GCCAAGGTCA AAAGTCTGGT ACGCAGCGAT
CCGTTTGCGT TGATTAGCGA TTTGATTGAA AAGCATTATG GCGTACAGGG GGAAGAGGTG
CGCCAGACGA TTTCTGCTGT TAGCATACCA GCTAAAATAG CGAAAACGCT GGGCGTTGAC
GCAGGCTATC CGGCATTAAA GATTGTTCGC CATTATCTGG ACCGCTCAGG AAACGTCTTT
GAAACCACGG TATCGATTCA TCCGGCGGAC CGATATACCT GTTCGATTAC GCTGAAACGC
CAAACGGGAA ACTGA
|
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| Protein sequence | MKEPLYKRIA RELSQNITLG RYPAGSLLPS ELELCEQYQV SRHTVREALR DLTEAGLVSR
RKGVGSVVVD NDEKCERNHP LASLEDLFVL AKNNLRVVKK IDEVVADVEL AKIIGGKPGD
RWLHIASIRE DSEKKDAPIC WTDSYVSPDY AKVKSLVRSD PFALISDLIE KHYGVQGEEV
RQTISAVSIP AKIAKTLGVD AGYPALKIVR HYLDRSGNVF ETTVSIHPAD RYTCSITLKR
QTGN
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