| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1483 |
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| Symbol | |
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| ID | 8132424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1730007 |
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| End bp | 1731359 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644864773 |
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| Product | fumarate lyase |
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| Protein accession | YP_003017063 |
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| Protein GI | 253687873 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0015] Adenylosuccinate lyase |
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| TIGRFAM ID | [TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.151746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTCGA ATGTGCTTGA TTCAGTTCTA TTCCGTGATT CATTTGGTAC CCCGGAAATG
CGGGCGATCT TCGATGACCG GGAACTCATC CGTAAGTATG TTGAAGTAGA AATCGCGCTG
GCCAATGCGC AGGCACGCTG TGGCGTCATC CCCGAAGACG CTGCCGCAGA AATCACAGCC
AGCTGTAACG CCGACACGCT CGATTTTGAG CTGCTGCGCC ACGAAACAGA AATTGTAGGC
TACCCAATCC TGCCGCTGGT GCATCAAATC TCCAAACAGG CGGGTCACTC TGGCGGTTAT
GTGCACTGGG GCGCCACGAC ACAGGACATT ATGGATACCG CCGTGGTGCT GCAAATCCGT
GATGCATTCG CGTTAATTGA AGCAGATATT GATGCACTGC GTTCTATTTT GGCTGGACTG
GCCGCACGCT ACCGTAATAC GCCCATGGCT GGGCGCACCC ATTTACAGCA GGCGCTCCCG
ATTACGTTCG GCTATAAAGC CGCCATCTGG CTGGATATGT TTGACCGCCA TGCAGAGCGC
CTGGCACAGC TGCGCCCGCG TGTGCTGGTA GGCGAATTCG CAGGTGCAGC CGGCACACTG
GCCTCGTTGG GTGATAAAGG ACTCGCGGTA CAAAAAGCTC TGATGGCCGA ACTCGGCCTG
GGCGTTCCTA CCTCAACCTG GCATGTTGCC CGTGATGGAT TTGCCGAAGC CGTCAACCTG
CTGGCTGTCA TCACGGGTTC GTTGGGCAAA ATTGGCTACG ACGTCATGCT CATGGCCTCC
AACGAATTTG GCGAACTGTA TGAACCGTTT GTCAAAGGCC GTGGCGCCAG CAGCACCATG
CCGCAAAAGC GTAATCCTAT CTCCAGTGAA CTGATGCTGG CCTGCGCCAA AGGCGTTCGC
CAACAGGCGG GGTTGATGCT GGATGCGATG GTCCAAGATC TGGAACGCGC CACGGGTCCC
TGGCATGCAG AATGGATTGC CATTCCGGAA AGTTTCATTC TCTCCGCTGG CGCGCTTCAT
CAGGCCAAAT TCATGCTGAA CGGCTTGATT GTGGATGAGA AAATGATGCT GAAAAACCTC
AACATGACCA ACGGCCTGAT TGTGGCTGAA GCCGTTATGA TGGGGCTGGC ACCGTATATT
GGCCGTCAGG AAGCACACGA CATCGTCTAC GATGCCTGCC GCATCGTGAA TGAGAAAGGC
GGTACGCTGG CCGATGTGCT CAATGCTATG CCCAGTGTCT CCAGCCGACT CGATCCTAAA
TTAATCAACG ATCTGACCAA CCCCGTCAAT TATTTGGGGA GCGCCCCTGA AATGGTGGAT
CAGGTATTAA ATAAAACAGA AAGACACCAT TAA
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| Protein sequence | MASNVLDSVL FRDSFGTPEM RAIFDDRELI RKYVEVEIAL ANAQARCGVI PEDAAAEITA
SCNADTLDFE LLRHETEIVG YPILPLVHQI SKQAGHSGGY VHWGATTQDI MDTAVVLQIR
DAFALIEADI DALRSILAGL AARYRNTPMA GRTHLQQALP ITFGYKAAIW LDMFDRHAER
LAQLRPRVLV GEFAGAAGTL ASLGDKGLAV QKALMAELGL GVPTSTWHVA RDGFAEAVNL
LAVITGSLGK IGYDVMLMAS NEFGELYEPF VKGRGASSTM PQKRNPISSE LMLACAKGVR
QQAGLMLDAM VQDLERATGP WHAEWIAIPE SFILSAGALH QAKFMLNGLI VDEKMMLKNL
NMTNGLIVAE AVMMGLAPYI GRQEAHDIVY DACRIVNEKG GTLADVLNAM PSVSSRLDPK
LINDLTNPVN YLGSAPEMVD QVLNKTERHH
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