Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1474 |
Symbol | |
ID | 8132413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 1721757 |
End bp | 1722752 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644864763 |
Product | quinone oxidoreductase, YhdH/YhfP family |
Protein accession | YP_003017055 |
Protein GI | 253687865 |
COG category | [C] Energy production and conversion [R] General function prediction only |
COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
TIGRFAM ID | [TIGR02823] putative quinone oxidoreductase, YhdH/YhfP family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAGG GTATTTTGAT CGAAAAAAAT GCGGATGGCG TTTTGTCTGT TGGCATAAGA TCTCTTTCTG AGTCCCAACT GCCTGAAGGT AACGTTACCG TCCGGGTAGC CTGCTCAACA CTCAACTATA AAGACGCGTT AGCCATCACC GGAGAATCAC CCGTTGTTCG ACAGTTTCCA ATGGTGCCAG GAATCGATTT CGTCGGTATT GTCGATAGCT CATCAGATCC GTCTTTCAAG ACTGGCGACA AGGTTATCCT TAATGGCTGG GGCGTTGGAG AAAAACACTG GGGTGGGCTG GCGGAAATAG CTCGCGTAAA GGGGGACTGG CTCATCCCGC TACCTAACAA ATTTTCTGCA CGTCAGGCTA TGGGGATAGG GACCGCTGGT TATACAGCAA TGCTGTGTGT CATGGCACTT GAGCAGCAGG GTGTTAAACC CGGTAAGGGC GAGGTGCTGG TCACCGGCGC GTCAGGAGGT GTGGGCAGTA TCGCTGTTGC GATCCTCACC AGTCTGGGAT ATGAAGTTGC AGCTGCCACA GGGCGGTTAG AGGAAGCAGA TTTCCTTCAC TCACTGGGTG CGAAGAAAAT TATCGATCGT AAAACCCTGA GCGAACCGGG TCGGCCACTC GCCAAAGAGC AATGGCAGGC CGCAATTGAT GTTGCAGGAG GGCATACCCT CGCCAATGTA TGTGCGTCAA TGCAATATCG GGGAGTAGTT GCTGCATGTG GTCTTGCTGC TGGCATGGCA TTCCCGGCCT CTGTTGCCCC TTTCATTCTT CGCGGCGTGA AACTCATTGG CGTGGACAGT GTGATGGTTC CTAAGGAAGA GAGGATAGAA GCCTGGCAGC GTCTTGAAAG AGATCTGGAT ATGGACAAAC TGGAATCTCT CATCTGCGAT ATCTCCCTGG AAGAAGCTCT CGAGGTTGCG CCTACACTTC TTGCTGGTCG TGTCCGTGGC CGGGTCGTCG TGCCATTGAC TGCATCTGGA GAATAA
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Protein sequence | MFKGILIEKN ADGVLSVGIR SLSESQLPEG NVTVRVACST LNYKDALAIT GESPVVRQFP MVPGIDFVGI VDSSSDPSFK TGDKVILNGW GVGEKHWGGL AEIARVKGDW LIPLPNKFSA RQAMGIGTAG YTAMLCVMAL EQQGVKPGKG EVLVTGASGG VGSIAVAILT SLGYEVAAAT GRLEEADFLH SLGAKKIIDR KTLSEPGRPL AKEQWQAAID VAGGHTLANV CASMQYRGVV AACGLAAGMA FPASVAPFIL RGVKLIGVDS VMVPKEERIE AWQRLERDLD MDKLESLICD ISLEEALEVA PTLLAGRVRG RVVVPLTASG E
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