Gene PC1_1471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1471 
Symbol 
ID8132410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp1720652 
End bp1721239 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content43% 
IMG OID644864761 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_003017053 
Protein GI253687863 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACATCAA CGATTATCGC AGGGTTTTTG ACTTATACGC TTATTACTGC ATTGACACCA 
GGACCTAACA ATATCCTCGC GTTAAGCTCG GTTAATCAAT ATGGCTTCCG GCGTAGCCTT 
AGGGTGCTTG CAGGTATGTG TGCAGGTTTT CTTATTATTA TGCTGCTGTG TGCGGTATTC 
ACTTTCACAC TTATCAGCAT ACTGCCGTCT TTGACTGGCT GGCTTACTTG GGCAGGTGCC 
GCCTATATAC TTTGGCTGGC GTGGCGTATT GCTAACAGTA ATCCTACATC CTCATCTGGT 
GAAGAAAAAC CGCTTAGTTT TTGGGTTAGC TTTTGGCTCC AGTTCGCTAA TGTCAAAATA 
ATTCTTTATG GCATTACGGC TCTTTCTACG TTTGTTCTTC CGCACACGCA TGATGTGCAT 
AAGGTAATGG CCGTCAGCCT TCTTTTAGCC TTTATTGGTT GTTTCGGTAA TTTCGTGTGG 
GCTTTGGCTG GTCATTTATT CCAGTCTATT TTCCAGCGTC ATGGACGCGT AGTTAATCTT 
ATTTTATCTG CGTTATTAGT CTATTGTGCG ATAAGAATGT TTATCTGA
 
Protein sequence
MTSTIIAGFL TYTLITALTP GPNNILALSS VNQYGFRRSL RVLAGMCAGF LIIMLLCAVF 
TFTLISILPS LTGWLTWAGA AYILWLAWRI ANSNPTSSSG EEKPLSFWVS FWLQFANVKI 
ILYGITALST FVLPHTHDVH KVMAVSLLLA FIGCFGNFVW ALAGHLFQSI FQRHGRVVNL 
ILSALLVYCA IRMFI