Gene PC1_1454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1454 
Symbol 
ID8132393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp1705462 
End bp1706073 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content54% 
IMG OID644864744 
ProductNmrA family protein 
Protein accessionYP_003017036 
Protein GI253687846 
COG category[R] General function prediction only 
COG ID[COG2910] Putative NADH-flavin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.296873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACATA TCGCACTCAT TGGCGCCTCA GGCGGTGCCG GTTCACGCAT TCTTAAAGAG 
TTATCTGACC GTGGACATAC GGTCACCGCC ATTGCACGTC ATCCAGAAAA AATCGCCTCG 
CTGCCGAACG TCACCGCTAA GCAGGGGGAC GCACTGGACA AGGATGCACT GGTCGCCTTA 
TTCAAAGGGC ATGATGCCGT GGTCAGCGCC GTTAAATTTG GTTCGTCCGA TCCAACAACA 
CTGATTGCCG CCGTTAAAAC CGCAGGCGTA AAACGCTATC TGGTCGTCGG CGGCGCGGGG 
AGTCTGGAAA TTGCACCGGG TCAACGTTTG ATCGATCAGC CGGACTTCCC TGATGCTTAC 
CGCCCTGAAG CTTCTCGTGG TGCAGCTTTC CTCGACTTGT TAAAACAAGA GAAGGATCTT 
GATTGGTCAT TCCTCTCTCC GTCCGCCGAA TTTGTTCCCG GCCAGCGCAC AGGCACCTTC 
CGCCTCGGCA AAGATGCGCT ACTAAGCAAT GACAAAGGCA GCAGCATCTC CTTCGAAGAC 
TATGCTGTCG CGCTGGTTGA TGAAATTGAA AACCCGGCAC ATTCGCGTCA GCGCTTTACC 
GTGGGTTATT AA
 
Protein sequence
MSHIALIGAS GGAGSRILKE LSDRGHTVTA IARHPEKIAS LPNVTAKQGD ALDKDALVAL 
FKGHDAVVSA VKFGSSDPTT LIAAVKTAGV KRYLVVGGAG SLEIAPGQRL IDQPDFPDAY 
RPEASRGAAF LDLLKQEKDL DWSFLSPSAE FVPGQRTGTF RLGKDALLSN DKGSSISFED 
YAVALVDEIE NPAHSRQRFT VGY