Gene PC1_1447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1447 
Symbol 
ID8132386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp1696426 
End bp1697064 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content57% 
IMG OID644864737 
ProductParaquat-inducible protein A 
Protein accessionYP_003017029 
Protein GI253687839 
COG category[S] Function unknown 
COG ID[COG2995] Uncharacterized paraquat-inducible protein A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.237229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGACCA TTTACCCCCA CTTAATTATC TGTCCGCACT GCGACAGCGT GCACCATTAC 
CGGGCGTTAA ACCCCGGTGA GGCGGCTCGC TGCACGCGCT GTCAGGCCAC ACTTTATCGT 
TCAGGTTGGC TGAATACCGG GCATCGGTTG GCGCTGATAC AAACGGCAGC CATCCTGTTT 
TTTATCGCTA ATAGCTATCC GGTGCTGACC GTCAGTTTTC ATGCGTTACA GAATACAGCC 
ACACTGTGGC AAGCCGCGCT CGCACTGGCC AACGGCGCCA CCCTGCCGCT GGCGATAGGC 
TGTTTTTTCC TTCTGATTAT TGCCCCTTTT CTGCAAATCG TGCTGACGGG CTGGGTGCTG 
ATGTTCGCCA ATCAGGGGCG CTGCGCCCCC GGTTTTATTT CTGTCATGAA GGTACTGCTG 
TGGCTTCGTC CCTGGAGCAT GCTGGAAATT GCAACGTTGG GTTTTCTGAT CGCCGCCATC 
AAACTCGCCG GTTTTATGCA GGTGATGCCA GGAGCGGGCT GTTGGACGCT GGCGGCGCTG 
ATGCTGCTGC TCATCGTCGT CAACAGTGTC GACCTTCGCC CACTGTGGTC GCTGATGCCC 
ACGGACGGTA ACCGCGGCGT GCTCAGCCAT GAAAAGTAA
 
Protein sequence
MMTIYPHLII CPHCDSVHHY RALNPGEAAR CTRCQATLYR SGWLNTGHRL ALIQTAAILF 
FIANSYPVLT VSFHALQNTA TLWQAALALA NGATLPLAIG CFFLLIIAPF LQIVLTGWVL 
MFANQGRCAP GFISVMKVLL WLRPWSMLEI ATLGFLIAAI KLAGFMQVMP GAGCWTLAAL 
MLLLIVVNSV DLRPLWSLMP TDGNRGVLSH EK