Gene PC1_1446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1446 
Symbol 
ID8132385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp1695813 
End bp1696436 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content57% 
IMG OID644864736 
ProductParaquat-inducible protein A 
Protein accessionYP_003017028 
Protein GI253687838 
COG category[S] Function unknown 
COG ID[COG2995] Uncharacterized paraquat-inducible protein A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.257026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGTA ATCCGTCCAC CCCGCCGCTG CAACTGGTTG CCTGTCCGCT GTGCGGCCTC 
GTCTGCCAGC ACGATGCCGA CTCACACGCT GTGGCGCGTT GCCCACGCTG CCGGTCGCGG 
CTGACGCCGT CACACAAGAG CAGCAGCGTA CACGCCTCTG CTCTGCTGGT TGCCGCCCTG 
ATTTTCTATA TCCCCGCCAA CGTGTTACCC GTGATGTACA CCCGTCTGTT CGGGCTAGGG 
AGCGAAAGTA CCCTCTTAAG CGGCGTGATC GATTTCTGGC ACAGCGGCGA CTACGGCATC 
GCCCTGCTGA TATTTATCGC CAGCATCGTC ATTCCCTGTA TGAAATTTCT GATTCTCGGC 
CTGCTGCTAT TCATGTCACG CCAAAAAAGC CGTAAAGCGA TGGCCGAGCG TGCGGCACTG 
TATCGGTTAA TGGAATGGGT GGGTTACTGG TCCATGCTGG ATGTCGTCGT CATTGCCGCC 
GTCTCTGCGC TCGTCAGATT TCCTCCCCTG AGTGAAGCGG AGCCCCGCAG CGGCATTCTT 
TTTTTTGGGC TGGTGGTGAT ACTGACCATG TTATCTGCCA TGAGCTATGA CCCGCGTCTT 
ATCTGGAAAG GTGACAAAAA ATGA
 
Protein sequence
MKSNPSTPPL QLVACPLCGL VCQHDADSHA VARCPRCRSR LTPSHKSSSV HASALLVAAL 
IFYIPANVLP VMYTRLFGLG SESTLLSGVI DFWHSGDYGI ALLIFIASIV IPCMKFLILG 
LLLFMSRQKS RKAMAERAAL YRLMEWVGYW SMLDVVVIAA VSALVRFPPL SEAEPRSGIL 
FFGLVVILTM LSAMSYDPRL IWKGDKK