| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1445 |
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| Symbol | |
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| ID | 8132384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1694173 |
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| End bp | 1695816 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644864735 |
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| Product | Mammalian cell entry related domain protein |
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| Protein accession | YP_003017027 |
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| Protein GI | 253687837 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3008] Paraquat-inducible protein B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.578149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCACG ACCAACCCAG CGATCCAGTG ATAATCCGCC AACGCTGGCG AATCTCATTG
ATCTGGCTGG TACCGGCGCT CGCAATGCTA ACGGGGCTCG CCATGTTGAT TCACACCTGG
TCGGGTACCG GGCCAGAAAT CGTGGTTTCC TTCCAGAGCG CAACCGGTCT TGAGGCCGGC
CGCACCATCG TCAAATATAA AGACGTGGCG GTAGGCACCG TAAAAGACAT CTCGCTGAGT
CAGGACAGCA ATCAGGTCCT CGTCACAGTG CAGCTCAATA AAAATGCGGA AAATCTGGCG
CATGCCGATA GCCGCTTCTG GGTGGTACGC CCACGTGTCG GCATCAACGG CGTCACGGGC
ATCGATACCC TGCTTTCCGG TGCTTACATC GGGGCAGATA AAGGCGAATC GGCTCAGAGA
GAGGCCCGTT TCGTCGGTTT AGAGTCGCCG CCTGCAGTGA TTAATGGCAT GCCGGGCAGC
CGTTTTGTCA TTCAAGCGGA CGATCTCGGG TCGCTGGATA GCGGCTCGCC AGTTTACTAC
CGCCGCATCC CCGTCGGCCG CGTCGCGTCC TATCAGTTGA ACCGCGATGG CCGCAGCGTC
CAGCTTCAGG TTTTTATCGA TGCGCCCTAC GACCGCTTTG TTACGCCGAA TACCCGTTTC
TGGAATGCCA GTGGAGTGGA TCTCTCGGTT GACGCCAACG GTTTTCGCCT CAAAACGCAA
ACCCTCGCTG CCGTTATGGC TGGCGGCATC GCATTTTCCA CTCCCGATCT GGACAGCACG
ATTGCCCGAC CGGAACCGCT CACGACCTAC AAACTGGCGA GCGATCGGGA ATCGGCCCTA
TCGCCGCCCG ATGGTCCCCC CATCCTCTTC AAACTCCGCT TTGATCGTTC ACTACACGGC
CTGGAGATCG GTGCACCCGT TGAATTCTCC AGTGTCAAAA TCGGCCACGT GACCACCATT
GAGCTGGATT ACAGCAAAAC GGGCTACCGT TTTCCGACGG TCGTCAGCAT TGAAGTGTTC
CCTAACCGTC TCGGCAACGT ACTGGATAAG CTGCCTAAGT CGACGACATC GCTTGAACAG
CAAACCGCAG AGTTTACGCG CGATCTGGTT GAACACGGCC TGCGTGCACA GGTTGCACCA
AGTAATTTGC TGACCGGACA GCTCTATATC TCACTCGATT TTGTGCCCGA TGCCGCGAAA
GTACCTTTTG ATATCAACGC CCGCCCGTTG GTTTTACCCA CCGTCAATGG CGGATTTGAT
CGGTTACAAA CGCAGATGGC AAGCATCATC GGCAAGATCG ATAACCTGCC GCTGGATGCC
ATCGGTCGCA ACATGAACAC CACGCTGGTC GAAGCCAATA AAGCGCTGCG ACAGGTCAAC
GGACAGACAT TGCCGGAAGC CAATCGATTG ATGAAAAACA TGCAGCTGGC CGCACGCCGT
GCACAGGATG TACTGGAAGA CGATTCACCG ATGCAGTTGA GCATCACACA GTCATTACAG
GAAATGCAGC GCACGCTACG CGCCCTGCGC AGCCTGGCAG AACAGATTGA CCGTCACCCG
GAATCACTGC TGCAAGGGCG ACCAGCCGAC GCGTCGCTGA CAGTTAATCC CGACTCCCTT
TCCCGAGAAG GATCTTCGAA ATGA
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| Protein sequence | MIHDQPSDPV IIRQRWRISL IWLVPALAML TGLAMLIHTW SGTGPEIVVS FQSATGLEAG
RTIVKYKDVA VGTVKDISLS QDSNQVLVTV QLNKNAENLA HADSRFWVVR PRVGINGVTG
IDTLLSGAYI GADKGESAQR EARFVGLESP PAVINGMPGS RFVIQADDLG SLDSGSPVYY
RRIPVGRVAS YQLNRDGRSV QLQVFIDAPY DRFVTPNTRF WNASGVDLSV DANGFRLKTQ
TLAAVMAGGI AFSTPDLDST IARPEPLTTY KLASDRESAL SPPDGPPILF KLRFDRSLHG
LEIGAPVEFS SVKIGHVTTI ELDYSKTGYR FPTVVSIEVF PNRLGNVLDK LPKSTTSLEQ
QTAEFTRDLV EHGLRAQVAP SNLLTGQLYI SLDFVPDAAK VPFDINARPL VLPTVNGGFD
RLQTQMASII GKIDNLPLDA IGRNMNTTLV EANKALRQVN GQTLPEANRL MKNMQLAARR
AQDVLEDDSP MQLSITQSLQ EMQRTLRALR SLAEQIDRHP ESLLQGRPAD ASLTVNPDSL
SREGSSK
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