Gene PC1_1443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1443 
Symbol 
ID8132382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp1692958 
End bp1693572 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content54% 
IMG OID644864733 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003017025 
Protein GI253687835 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.79888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTCC GAACTAAGGC GCGTCGAGAA GCCATCGTTA AAACGGCGGC GCAGCTTTTT 
CAGGAAATGG GCTATGAACG GGCCACCATG AATGAGCTTG CGAAGCGGGT CGGCGGTTCC 
AAAGCGACGC TATATGGGTA TTTCTCAACC AAAGAAGCGC TGTTTACGGC GGTTGTTCGT 
GAACATGCGA CGATGCATCT GTCTGAGGCA ACCGCCGAGC TGGTGACAGA CATGCAGGTA 
TCCGAAACGT TGGAGGTACA GCTAACGCGC TTTGGCGAAC GCATTCTGTA TGTGCTAACC 
AACGATAGCA GCGCCATGGC GATTTATCGC ATGGTGGTGG CGGAAGCTGG ACATTCCGAT 
ATTGGTGCGC TGTTTTATGA ATCTGGCCCG AAAGAGAATG TCGATAAACT GTCTGAACTG 
ATGGCGGCGG CGATAGCGCG GCAGGCGCTG AAAGCAGGGG ATCCGCGCGT GCGGGCGCTG 
CAATTTTTGG CGCTGCTGAC GGCAGAAATT GATGACCGCA TCTTCCACCG CCATTTACAG 
CCCATGAGCC TCGAACGCAT TCGTGAGATC GTAGGAAATG CGGTCAGTAT GTTTATGGCT 
GGAGCGGCGG CGTAA
 
Protein sequence
MKVRTKARRE AIVKTAAQLF QEMGYERATM NELAKRVGGS KATLYGYFST KEALFTAVVR 
EHATMHLSEA TAELVTDMQV SETLEVQLTR FGERILYVLT NDSSAMAIYR MVVAEAGHSD 
IGALFYESGP KENVDKLSEL MAAAIARQAL KAGDPRVRAL QFLALLTAEI DDRIFHRHLQ 
PMSLERIREI VGNAVSMFMA GAAA