| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1442 |
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| Symbol | |
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| ID | 8132381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1691725 |
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| End bp | 1692462 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644864732 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003017024 |
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| Protein GI | 253687834 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.600459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTGTAT TTTGCTCTGA TAATGAAATT ATCAATAACA CGATAAAAAG CTATCTCGGC
CGAAAGTTAA AGCAGTATGG CGACCTGAAA TATGCTTATA TGATCATGAA CAAGAAAAAC
CCGTCTCAGG TTGTGATCAT CTCAAATTAC CCGCAGGAAT GGGTGAATAC CTATAAAGAA
AATAACTATC AGCATATCGA CCCGGTTATT TTGACGGCGA TAAATAAAGT CTCGCCTTTC
TCCTGGGAAG ACAACATCGT TATTAACTCT AAGCTGAAGT TCTCCAAGAT TTTTAATCTG
TCAAAAGAGT ACGATATTGT TAATGGCTAC ACCTTTGTGT TGCATGACAA CAATAATAAT
CTGGCAGCCC TATCGATTAT GTTTGAAGAG CACTCACCAA CGGATATTGA AAGTATTGTC
GAGGAAAACA AAGACAAACT ACAAATGCTG CTCATCACCG TTCATGAGAA AATCACCACG
CTTTACAAAG AGATGACGCA AAGCACCCAG AGCAGAAAAC AAGGCGACAA AGAGATTTTC
TCCCAGCGTG AAAACGAAAT TCTGTACTGG GCCAGCATGG GAAAAACCTA CCCGGAAATT
GCGCTGATTC TGGATATCAA AATCAGCACC GTGAAATTCC ATATTGGCAA TGTGGTAAAA
AAATTGGGTG TTCTCAATGC CAAGCATGCC ATCAGGCTGG GCGTAGAATT ACAGCTCATC
AAACCTGAAC CCTCATGA
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| Protein sequence | MSVFCSDNEI INNTIKSYLG RKLKQYGDLK YAYMIMNKKN PSQVVIISNY PQEWVNTYKE
NNYQHIDPVI LTAINKVSPF SWEDNIVINS KLKFSKIFNL SKEYDIVNGY TFVLHDNNNN
LAALSIMFEE HSPTDIESIV EENKDKLQML LITVHEKITT LYKEMTQSTQ SRKQGDKEIF
SQRENEILYW ASMGKTYPEI ALILDIKIST VKFHIGNVVK KLGVLNAKHA IRLGVELQLI
KPEPS
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