| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1441 |
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| Symbol | |
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| ID | 8132380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1689870 |
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| End bp | 1691690 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644864731 |
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| Product | ABC transporter related |
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| Protein accession | YP_003017023 |
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| Protein GI | 253687833 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.279774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAAA AGCGTGCCTC AATAAACAAT ATCACCATAA ATAATGCCGC CATAACGGCG
CGGCTATCCG CGTGGTGGCA CACGTATCGT CAACTGGAAC GCGTCACGGG TTCGCAGGTT
CTCCACTTCC GTTGGTGTTG CCTGAGCTTG CTGGCGGCGG CTGTTGCGCA AGGGTTAGCG
CTGGCGTGCC TGTTTCCGCT GCTGTCTGCG TTCACGCGCG CGGCGGCGGC TCGCGAGATA
GCGATATGGC TGACGATCAT GACATTTCTG AGCCTGTTGA CGCTGGTACT GCGTTGGTAT
GGTCAAGGGT TTGAATATCG CGGGCAGCTT GCGGCGGCGA CCCATGAACT GCGTATGCGT
CTGGGAGAAC AACTGCGGAG TATGCCGCTG AGCACGCTTC AGTCCGCACG GGCGGGGGAT
ATCAACGCGC TGCTGCTAGG CAGTGTGGAT GAGAACCTGA ACTATATGCT GGCGATAGTA
AACCAACTGC TGCTGGCTAT TGTGACGCCT GTCGTGATTG CGCTTATCAT GCTGGTGGTC
GAGTGGAGGT TAGGCGTCAG CCTGTTGCTG CTTTTTCCCG TCATCGCGCT GCTTTATCGC
TGGAGGCGGC CTGCATTTGC GCACACGATG CAGGCGCTGG CGGAGGCTAA CCAGCAAACC
AGCGCCGATA TTGTGGAATA TGTGCAGGGT CTTGCCGTCC TGAGAACCAG CTGCCAGCAG
GCTGAGCGCA CATCGGCGCT GCGTCAGCGT TTTCAGCATC TACAGCAGAT ACAGACGTCA
TCTCACCGTC GAGGTGCCAA ACCCGGTGCG GTGGTCGCCA GCGTCGTGGA GTTGGGCCTT
CAGGGGGTGC TGATTCTGGG GATTAGCGGC GTTGTAGTGG GGGCGTGGGA TGCGGCCATC
GTCGCCGCGA TGATGGTCAT TGTCGTGCGC TTCTCTGAAC CGCTGGCAAC GCTTGTCAGC
TATACGGCCG TACTGGAGTT GATTGAGACG GCGCTGCGTC GGGTTGACGA TCTGCTGGCC
ATTGAACCGC TGCCACTGCA TCAGCCCGTC GCTGTGCCGA CAACGTATGC GATTACGTTC
GAACAGGTGA GTTTTCACTA CGTGGATGAG GCTGAACCGG TACTCGATGA GATAAACATC
ATGCTACCGG AGAAGGGAAT GACGGCGCTG GTCGGGCCGT CGGGTTCGGG GAAAACGACG
ATAACACGAC TGTTAATGCG CCATGCGGAT CCGCAACGCG GGCGCGTTTG TATCGGCGGC
GTCGATATCC GCCACATTCC AACGCGTGAA TTAAATCGGC TGATTTCCGT GGTATTTCAG
GACGTCTATC TATTTGATGA TTCGGTGTTG GCAAATATTC GGATGGCACG CCCGGAGGCC
AGCGACGCAG AGGTTGAACG GGCTGCGGAG GCCGCCCAGT GTCTGGAGTT TATTCAACGG
CTGCCGCAGG GATGGCAAAC GCGACTGGGC GACATTGGCG GCCGATTATC CGGCGGTGAA
CAGCAGCGTA TTTCAATCGC GCGAGCCTTA TTGAAGGAGG CGCCAATTGT GATTCTGGAT
GAACCGACAG CGGCGTTAGA TACCGAAAGC GAGCTAGCCG TACAGCGGGC GATTGACAGG
CTGGTACAGG ACAAAACGGT CATTGTTATC GCACATCGAC TATCGACGAT CGTGGGGGCA
CATCGCATTC TGGTTGTGGA GAAGGGCGTT ATTTCCCAGC AGGGAACACA CCGCGAATTA
CGGCTTGCTG AAGGGCGTTA TCGCGCGTTG TGGAATGCAC AGCAGAAGAG TAAACGTCTA
TCCCATAATG CTCAGGTTTA A
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| Protein sequence | MNEKRASINN ITINNAAITA RLSAWWHTYR QLERVTGSQV LHFRWCCLSL LAAAVAQGLA
LACLFPLLSA FTRAAAAREI AIWLTIMTFL SLLTLVLRWY GQGFEYRGQL AAATHELRMR
LGEQLRSMPL STLQSARAGD INALLLGSVD ENLNYMLAIV NQLLLAIVTP VVIALIMLVV
EWRLGVSLLL LFPVIALLYR WRRPAFAHTM QALAEANQQT SADIVEYVQG LAVLRTSCQQ
AERTSALRQR FQHLQQIQTS SHRRGAKPGA VVASVVELGL QGVLILGISG VVVGAWDAAI
VAAMMVIVVR FSEPLATLVS YTAVLELIET ALRRVDDLLA IEPLPLHQPV AVPTTYAITF
EQVSFHYVDE AEPVLDEINI MLPEKGMTAL VGPSGSGKTT ITRLLMRHAD PQRGRVCIGG
VDIRHIPTRE LNRLISVVFQ DVYLFDDSVL ANIRMARPEA SDAEVERAAE AAQCLEFIQR
LPQGWQTRLG DIGGRLSGGE QQRISIARAL LKEAPIVILD EPTAALDTES ELAVQRAIDR
LVQDKTVIVI AHRLSTIVGA HRILVVEKGV ISQQGTHREL RLAEGRYRAL WNAQQKSKRL
SHNAQV
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