| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1440 |
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| Symbol | |
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| ID | 8132379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1688044 |
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| End bp | 1689870 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644864730 |
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| Product | ABC transporter related |
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| Protein accession | YP_003017022 |
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| Protein GI | 253687832 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.279774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACATT CCGCTGTTGA GGGCGGTTCA TCCGCTGCCA CGCCGCCTTC TACGCCACAG
AGCCGCGCCT GGCACATTAT GCACCCTGTA AGAGGGCAGA TTCGTTTGGC GATGTGCCTG
TCAGGGCTGT CGGTTCTGGC TGGCATCGCA TTTCTGCTTT TTCTGGCATG GGGTATCCGA
CTGCTCATTT TACAACCCGC GTCATGGCCG TTGTTGACGA TGGTCGGGGC GGTGCTGTGT
TTGAGCGCCA GCTATCTGCT GCGTTTGCTG GCTTTTGACC AGTCTCACTA TGCCGCATTC
CGGCTGGAAA ACCAGATTCG TATCGCGCTG GCAGAACAGC TGGCGCGGAT CCCACTGGGC
GAGGTGCGGC GTTTGGGTAC GGGCTCGCTG GCAAAGATCG TGCAGGACGA TGTCAAAGCG
CTCCACCTGT TTGTGGCGGA CAGCACGCCG CTCTATGCGC GTGCTTTTGT GGCGCCGCTG
TGTACGGGGG CATTGTTGTT CTGGCTGGAC TGGCGCTTAG CACTGGCAGC CTTGCTGGTG
CTGCTCGTCG GCGCTGCCGT GCTGACGCTG GCGATGCGCG ATGCCGGTGA GATGAACCAA
CGCTATAACC AGGCGCGGGA AGCGGTTAGT ACGGCAGTGA TTGAATTTGT ACAGGCAATG
CCGGTAGTGC GTACCTTCGA TACTGGCGCG TCAACGTTTG GACGTTACCA GCAGGCGCTG
GAACATTATC TGGACGTGCT CACGCGCTGG TATCAGCAAG CGGGTTTCTC GGCGCGTTTC
TCCTTCGCGA TACTTAATCC GCTTCCAACG CTGCTGGTGC TGTGCTGGGT GGCGTACGGT
TTCTATCATT CCGGCGATCT TGATTTCAGC CTGTGGGTAG CGGTGCTGCT GCTCGGCAAT
GGCATGGCAG AGGCCATTAT GCCAATGATG GCACTGAATC ACATGGTGGC GAAAACCCGA
TTGAGCATCA GCCGGATTCA GGACGTGTTG GCATTGTCGC CGCTGCCGGA AGCGGAAAAT
GATGCCTTAC CCGCTGATGC CAGTGTGAGC TTTGAGCAGG TGAGTTTTCG CTACGACCGG
CACGTGAGCG ACTGGGTGCT GGAGGATGTC AGTTTTCAGG TGCCAGCAGG ATCGGTTACG
GCGCTGGTGG GCGCATCTGG CGCGGGGAAA ACCACCGTGG CGCGGCTTAT TCCTCGGTTT
TGGGACGTAA CCGCCGGGCG CATTTTGATT GGTGGTGTTG ATATCCGACA GATGAAAACC
GCCACGCTCA TGCAGCAGGT GTCGTTTGTT TTTCAGGAGT CTTTCCTGTT TGCGGACACT
ATCGCCAATA ACATTCGGCT GGGTGTGCCG GAGAAAAGCA TGGACGAGGT GATTGCCGCC
GCAACGGCAG CGCAGGCGCA CGATTTTATC ATGGCGCTGC CGCAGGGCTA CGACACGCCA
GCCGGTGAGC GTGGCCAGTT CCTTTCCGGC GGTCAGCGTC AGCGCATCGC CATTGCGCGG
GCGCTACTGC ATAACCGGCC GATTCTGGTG CTGGACGAAC CCACGGCGTT TGCCGACCCG
GAAAACGAGG CAGCACTGCT GGCGGCACTC GGCGTACTTA TGCGAGGTAA AACGGTCATC
ATGGTGGCGC ATCGACTGTC GACGATTCGT GATGCCGATC AGATTGTGGT TTTCGATCGC
GGGCGGCTGA GCGAGTCGGG TCGCCATGAT GCGCTGTTGG TTGCACAAGG CCGCTATAGC
GAACTGTGGC GGCATTATGA GCAGGCGCAG AATTGGGCGT TAGGCGGCGC ATCATCAGTT
AATGGGCAGG CAGGAGAGCG GGCGTGA
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| Protein sequence | MPHSAVEGGS SAATPPSTPQ SRAWHIMHPV RGQIRLAMCL SGLSVLAGIA FLLFLAWGIR
LLILQPASWP LLTMVGAVLC LSASYLLRLL AFDQSHYAAF RLENQIRIAL AEQLARIPLG
EVRRLGTGSL AKIVQDDVKA LHLFVADSTP LYARAFVAPL CTGALLFWLD WRLALAALLV
LLVGAAVLTL AMRDAGEMNQ RYNQAREAVS TAVIEFVQAM PVVRTFDTGA STFGRYQQAL
EHYLDVLTRW YQQAGFSARF SFAILNPLPT LLVLCWVAYG FYHSGDLDFS LWVAVLLLGN
GMAEAIMPMM ALNHMVAKTR LSISRIQDVL ALSPLPEAEN DALPADASVS FEQVSFRYDR
HVSDWVLEDV SFQVPAGSVT ALVGASGAGK TTVARLIPRF WDVTAGRILI GGVDIRQMKT
ATLMQQVSFV FQESFLFADT IANNIRLGVP EKSMDEVIAA ATAAQAHDFI MALPQGYDTP
AGERGQFLSG GQRQRIAIAR ALLHNRPILV LDEPTAFADP ENEAALLAAL GVLMRGKTVI
MVAHRLSTIR DADQIVVFDR GRLSESGRHD ALLVAQGRYS ELWRHYEQAQ NWALGGASSV
NGQAGERA
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