| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1439 |
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| Symbol | |
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| ID | 8132378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1686827 |
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| End bp | 1687795 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644864729 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003017021 |
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| Protein GI | 253687831 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.257773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACGCCT CCCCACTGAA AGCCACCAGC GAACCTGAAG TCACTATTTC AAATTTGATT
GCTGAACTGC ACGTTGTGCG GCCGGACACC GGTGCGGACT GTAGCCTGCT GCGCGCTACG
CTTCAGGAAG GGCTGGATAT TCTGGTGTGG CGTGGACAGT TCCGACAGCC CACCACCATG
CATTTGCATG ACGACTGGGG ACGCATCAAT TTTTCCTGTT CATTGCAGGG AGATTCGCAA
TTTGCACTGA AAGGCGATCG GGGGCGTGAA CATCTGCTGA AGCAAGGTTC GGGCTGCATT
AGCTACACTC CAGACTGTCA GGGTACGTCG TCTTACGCCG GGCAGTTTGA AAGTGTCACC
GTATCGCTAA GCCCCGAGCT ACTGGCTAAC TGGGTGCCGG ATCTCGCCGG TAACCTGCAA
CAGCAGTTGG ATTCCGGTAG GCTCTGCACC CACTGTGACT GCAACGCCGA AATGCGGGCA
ACGGCTCAGG TATTAAGCCA TGCGCTGTCT GGGTTGACGC ATCCGCAGCA GGTCGGTGAA
AGCCGCCATG CACCGCTGTG GCTGCTGGGA CAAAGCATGA TTATGGTGAG TCTCGCCGTC
GCCGGACATG CCGACACCGC CCCCCAGCAG GACACGCTGA GTCTGGCCGA TCGCCACAAG
CTGCTGCGCG CCAAAGATCT GCTGTTAGCG GATCTGTCAC AGGCACCCAC TATCGCCATG
CTATCCAGAG AAACCGGGTT AAGCGTACTC AAGCTGAAAC GTGGGTTTCG CCTGCTCTTC
AATAACAGCA TCTATGGGTT ATTCCAGGCC GAACGTATGC ACGAAGCGCG GCGTCGCTTG
TTTGCCACAG GTGCCCCCGT TATGGTGGTT GCCACCGATC TGGGCTATGC CAACGCCAGC
CACTTTAGCG CCGCTTTCCA AAAGCAGTTT GGCGTCACAC CTTCCGCTTT CAAGCGCCTG
AACATTTAG
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| Protein sequence | MNASPLKATS EPEVTISNLI AELHVVRPDT GADCSLLRAT LQEGLDILVW RGQFRQPTTM
HLHDDWGRIN FSCSLQGDSQ FALKGDRGRE HLLKQGSGCI SYTPDCQGTS SYAGQFESVT
VSLSPELLAN WVPDLAGNLQ QQLDSGRLCT HCDCNAEMRA TAQVLSHALS GLTHPQQVGE
SRHAPLWLLG QSMIMVSLAV AGHADTAPQQ DTLSLADRHK LLRAKDLLLA DLSQAPTIAM
LSRETGLSVL KLKRGFRLLF NNSIYGLFQA ERMHEARRRL FATGAPVMVV ATDLGYANAS
HFSAAFQKQF GVTPSAFKRL NI
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