| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1432 |
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| Symbol | |
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| ID | 8132371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1677765 |
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| End bp | 1679378 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644864722 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003017014 |
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| Protein GI | 253687824 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.300396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAGT CGATACTGCT GAAAAAAAAC GCGAACATCT GGCCTGCTCT ACCGACAGCA
CGGGCCTATT CTCTTGTCGT GCCAAGAATT GTGTCGCTTG TAGTACCACT AATTGTGCCG
CTGGCACTGC TGGCGCTGTG GTATATCAGC ACCCACTACG GCTGGATGCC CGCCCAGATT
CTCCCTGCCC CCAACGTCGT CGCTAACACC GCCGTCGAAC TCTGGCACAA CGATCTCCTG
CCACAGCTCT TTATCAGCCT GCAACGGTTG GCCAGCGGTC TGCTGGCAGG CTTACTGGCG
GGAACGCTGC TTGGCGCGCT CATGGGCGCT TCGCGCCGCG CCGAACATTT GCTGCATCCG
ACGGTATACG CGCTGGCACA GATCCCGACG CTGGGCTGGA TCCCGCTATT TATGGTGCTG
TTTGGTATTG ATGACGGCTT AAAACTTGCG GTCATCATCA AGGCGGTAAT TATCCCGGTG
ACGCTGCATA CGCAAACGGG CGTGCGCAAC GTGCCGCATG CGCTCCAGGA AGTCGCCCAC
ACTCTGCGCC TGCCGTGGCA TCAGCGCCTC ATCAAATTAA CGTTGCCTGC CGCACTCCCC
ACCTGGCTAA CCGGCTTACG GCTGGCGCTT TCGCAGGCAT GGGTATCGCT GATTGTGGTC
GAACTGCTGG CGTCGTCTCA GGGCATTGGC TACCTGCTGG TATGGGGACG CCAGCTGTTT
CAACTGGATA TCGTGTTTGT CTGCATCGCC GTGATAGGTC TGGCAGGGCT GGCGATGGAG
TGGACAATCA ATCAGCTGGA ACGTCGTCTG GTCTTCTGGC CACATCCGCC GCTCAGTCGC
TTAACCGCTG CGCCGTCTCG CCGCTTATCC GCGCTGGTTT TACCGTTCCT GCTTCTGCTG
CTCTGGCAAC AGGCCAGCCG TTTTGGCTGG ATCGATCCGT TACTCCTGCC ACCGCCCGCA
GACGTGTGGC ACATGTTGCG GCAAGGCGTC CACGACGGTT CACTCACTGA GGCAATGCAG
GCCAGCCTGA CTCGCGCGCT CGCCGGTGCG GTATGCGGCA TTGTTGCTGG GCTAGTAGGC
GGCGTACTGC TGGGGCTAAG CGCCACCAGC GACGCTCTTT TTACACCCAC GGTCGCGACG
CTGCGTCAGA TCGCGCTGTT TGCCTGGCTA CCGCTGCTGA CCGCCTGGGT TGGCAACGAT
GAAGCCGGGA AAATCACCTT TGTCACCCTG GCCTCCTTCT TCCCCATGCT GGTAGCCAGC
CATCGCGGTA TCCGCCAGCG TTCGCAGGCC TTACAGGAAG TCGCACAGGT GTTACAGCTC
CGTCTCTCAA CCCGTCTGAG GGTGCTGATT CTGCCGGGTG CTGCTCCCGC CATCTTTGCG
GGTTTACGTC TGTCGCTGAT TTACGCCTGG CTTGGCACCA TCGGCGCGGA ATATTTCATG
TCATCCGGCA CGGGAATCGG CAGCCTGATG ATCAACGCCC AACAGTTACT GGATATGCCC
CTCATTATCA GCGGCATGCT GTTGATTGGA TTAACAGGCG CGGTACTCGA CCGCGTTGGA
TTAGGTCTGG AACAGCGGAT GACGCGCTGG CGTTCCGCAG GAGAAATCGC ATGA
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| Protein sequence | MNKSILLKKN ANIWPALPTA RAYSLVVPRI VSLVVPLIVP LALLALWYIS THYGWMPAQI
LPAPNVVANT AVELWHNDLL PQLFISLQRL ASGLLAGLLA GTLLGALMGA SRRAEHLLHP
TVYALAQIPT LGWIPLFMVL FGIDDGLKLA VIIKAVIIPV TLHTQTGVRN VPHALQEVAH
TLRLPWHQRL IKLTLPAALP TWLTGLRLAL SQAWVSLIVV ELLASSQGIG YLLVWGRQLF
QLDIVFVCIA VIGLAGLAME WTINQLERRL VFWPHPPLSR LTAAPSRRLS ALVLPFLLLL
LWQQASRFGW IDPLLLPPPA DVWHMLRQGV HDGSLTEAMQ ASLTRALAGA VCGIVAGLVG
GVLLGLSATS DALFTPTVAT LRQIALFAWL PLLTAWVGND EAGKITFVTL ASFFPMLVAS
HRGIRQRSQA LQEVAQVLQL RLSTRLRVLI LPGAAPAIFA GLRLSLIYAW LGTIGAEYFM
SSGTGIGSLM INAQQLLDMP LIISGMLLIG LTGAVLDRVG LGLEQRMTRW RSAGEIA
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