Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1429 |
Symbol | |
ID | 8132368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 1674068 |
End bp | 1674976 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644864719 |
Product | putative transposase YhgA family protein |
Protein accession | YP_003017011 |
Protein GI | 253687821 |
COG category | [S] Function unknown |
COG ID | [COG5464] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.159084 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGCGC ATGATGCGAT TTTTAAACAG TTTCTCAGCG ATCCCGCTGT CGCAAAGGAT TTCTTCGCCA TCCATCTGCC AGAAGAAATC AGGAATATCT GCGATTTCGG TTCGCTACAA CTGCAATCGG CCTCTTTTGT TGACGAGGAA CTACGTGCAA GAATATCGGA TATGCTGTAT TCAATTCAGA CCACCGCAGG ACAAGGCTAT ATTTATTGTG TGATTGAGCA TCAGAGTCGT CCAGAAAAAC TGATGCCATT TCGCCTGCTG CGATACGCGC TGGCGGCCAT GCAACAGCAC CTATCTCAAG GCTACGATAC GTTGCCGCTC GTTGTTCCTT TGCTGTTTTA TCACGGCCAG CGTAGTCCTT ATCCCTACAC GCTACGCTGG CTCGACGGTT TTTCTGACGT TATTCAAGCA GAAAAACTCT ACAACGCCCC CTTTCCTTTG GTTGACCTGA CGGTGATACC AGATGACGAC ATCAAGACGC ATCGCCGCGT GGCGCTGTTG GAGCTGGTGC AAAAACACAT TCGCACGCGA GATATGCTGG AGCTGGCGCA GGATATCGGG CTATTATTTG AGCGCTGGCA GGTACCGCTG CCACAAAAAA GAGCGATACT GTTTTACATC GCGCGGAGCG GCAACACCTC AAGACCAGCA GAGTTTATTG AGGCCGTCGC GCAATCTCTG TCAACGGATC GGGAGGCGAT CATGACCATC GCACAGCAAC TTGAGAAAAT CGGGTTTGAA AAAGGCATCA AACATGGCAT GCAGCAAGGT ATGAAAGCCA GTGCCCGAAA CATTGCTCGT CAGCTTCTGC TAAGCGGTAT GGAACCTGCA CAGATTAGTG AGATTACCCA ACTGAGCGCT GAGGAACTGG AACAGCTTAT TGATTCACCA AGTGAGTAA
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Protein sequence | MAAHDAIFKQ FLSDPAVAKD FFAIHLPEEI RNICDFGSLQ LQSASFVDEE LRARISDMLY SIQTTAGQGY IYCVIEHQSR PEKLMPFRLL RYALAAMQQH LSQGYDTLPL VVPLLFYHGQ RSPYPYTLRW LDGFSDVIQA EKLYNAPFPL VDLTVIPDDD IKTHRRVALL ELVQKHIRTR DMLELAQDIG LLFERWQVPL PQKRAILFYI ARSGNTSRPA EFIEAVAQSL STDREAIMTI AQQLEKIGFE KGIKHGMQQG MKASARNIAR QLLLSGMEPA QISEITQLSA EELEQLIDSP SE
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