Gene PC1_1423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1423 
Symbol 
ID8132362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1665915 
End bp1667369 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content59% 
IMG OID644864713 
ProductAMP nucleosidase 
Protein accessionYP_003017005 
Protein GI253687815 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0775] Nucleoside phosphorylase 
TIGRFAM ID[TIGR01717] AMP nucleosidase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0684636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATAACA GCGACGTCAG TCTTACCGTC ACTCAGGCTC TGGATAAACT GGAAGCGCTG 
TATGATGACG CCGTCTCAGC GCTGCGCGAC GCCATCGGGG ACTTCATCAA TGATGGCACC
CTGCCCGATG CCAACGCGCG CGCGGCGGGA TTATTTTCCT ACCCAGCTCT GCGCGTCAGC
TGGAGCGGCA ATTCGACCGG CCATCCCCGC CATCGCGCCT ATGGACGTTT CACCCATCCC
GGCAGCTACT CCACCACCGT GACCCGCCCG GCATTTCTAC GCGCTTATCT GGCGGAACAG
CTTGCGTTGT TGGAGGGGGA TTATGATGTC ACCATTGACG TCAGCCCGTC ACAGCAGGAA
ATTCCGTTCC CCTACGTGCT CGACGGTTCC GACCTGATTC TTGACCGCTC CATGAGTGCG
GGCATCGCCA AACATTTCCC CACTACGGAA CTGTCACAGA TTGGAGACGA GACGGCCGAC
GGGCTGTTTC ATGCCACCAC CACATCGCCG CTGTCGCACT TCGACGCCCT GCGCACTGAT
TTCTCGCTGG CGCGGCTTCG CCACTACACC GGCACACCGG TGGAACATAT TCAGCCGTTC
ATCCTCTTCA CCAACTACAC CCGTTATGTC GATGAGTTTG TACGCTGGGC GTGTGCGCAG
ATTGCCGATC CCGATAGCCC CTATGAGGCA CTATCCTGCG CGGGCGGTAT CTACATCACC
GCCGAGACAC CGAACCCAGA GCAGACGGTG TCCGATCTGG CTTGGAAGAA CCATCAGATG
CCTGCCTATC ACCTGATCCC CCGTCAGGGT AAAGGGATTA CGATGGTCAA CATTGGCGTC
GGACCATCCA ACGCGAAAAC CATCTGCGAT CACCTTGCGG TGATGCGTCC GCATGCCTGG
CTGATGATTG GCCACTGCGG CGGCCTGCGC GAGAGTCAGT CCATTGGTGA TTATGTGCTG
GCACACGCTT ACCTGCGTGA CGATCACGTA CTGGACGCCG TATTGCCGCC TGACATCCCG
ATTCCCAGCA TCGCCGAAGT GCAGCGTGCG TTGTACGACG CCACTAAGAT GGTCAGCGGC
ATGCCGGGAG AAGAAGTTAA GCAGCGCCTG CGTACCGGCA CGGTGGTTAC CACCGATGAC
CGCAACTGGG AGCTCCGCTA TGCGGCCTCT GCTCTACGGT TTAATCTCAG TCGCGCCGTC
GCGGTAGATA TGGAAAGTGC GACAATTGCC GCGCAGGGGT ATCGTTTCCG AGTGCCTTAC
GGCACGCTGC TGTGCGTCTC GGATAAGCCA TTACACGGTG AAATCAAGCT GCCGGGACAG
GCAAACCGTT TCTATGAAGG GGCGATTTCG GAGCATTTGC AGATTGGCAT CTGCGCCATC
GATCTGTTGC GGGCTGAAAG CGATAAGCTG CACTCACGCA AACTGCGTAC CTTTAACGAA
CCGCCGTTCC GCTAG
 
Protein sequence
MHNSDVSLTV TQALDKLEAL YDDAVSALRD AIGDFINDGT LPDANARAAG LFSYPALRVS 
WSGNSTGHPR HRAYGRFTHP GSYSTTVTRP AFLRAYLAEQ LALLEGDYDV TIDVSPSQQE
IPFPYVLDGS DLILDRSMSA GIAKHFPTTE LSQIGDETAD GLFHATTTSP LSHFDALRTD
FSLARLRHYT GTPVEHIQPF ILFTNYTRYV DEFVRWACAQ IADPDSPYEA LSCAGGIYIT
AETPNPEQTV SDLAWKNHQM PAYHLIPRQG KGITMVNIGV GPSNAKTICD HLAVMRPHAW
LMIGHCGGLR ESQSIGDYVL AHAYLRDDHV LDAVLPPDIP IPSIAEVQRA LYDATKMVSG
MPGEEVKQRL RTGTVVTTDD RNWELRYAAS ALRFNLSRAV AVDMESATIA AQGYRFRVPY
GTLLCVSDKP LHGEIKLPGQ ANRFYEGAIS EHLQIGICAI DLLRAESDKL HSRKLRTFNE
PPFR