Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1423 |
Symbol | |
ID | 8132362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 1665915 |
End bp | 1667369 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644864713 |
Product | AMP nucleosidase |
Protein accession | YP_003017005 |
Protein GI | 253687815 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0775] Nucleoside phosphorylase |
TIGRFAM ID | [TIGR01717] AMP nucleosidase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0684636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATAACA GCGACGTCAG TCTTACCGTC ACTCAGGCTC TGGATAAACT GGAAGCGCTG TATGATGACG CCGTCTCAGC GCTGCGCGAC GCCATCGGGG ACTTCATCAA TGATGGCACC CTGCCCGATG CCAACGCGCG CGCGGCGGGA TTATTTTCCT ACCCAGCTCT GCGCGTCAGC TGGAGCGGCA ATTCGACCGG CCATCCCCGC CATCGCGCCT ATGGACGTTT CACCCATCCC GGCAGCTACT CCACCACCGT GACCCGCCCG GCATTTCTAC GCGCTTATCT GGCGGAACAG CTTGCGTTGT TGGAGGGGGA TTATGATGTC ACCATTGACG TCAGCCCGTC ACAGCAGGAA ATTCCGTTCC CCTACGTGCT CGACGGTTCC GACCTGATTC TTGACCGCTC CATGAGTGCG GGCATCGCCA AACATTTCCC CACTACGGAA CTGTCACAGA TTGGAGACGA GACGGCCGAC GGGCTGTTTC ATGCCACCAC CACATCGCCG CTGTCGCACT TCGACGCCCT GCGCACTGAT TTCTCGCTGG CGCGGCTTCG CCACTACACC GGCACACCGG TGGAACATAT TCAGCCGTTC ATCCTCTTCA CCAACTACAC CCGTTATGTC GATGAGTTTG TACGCTGGGC GTGTGCGCAG ATTGCCGATC CCGATAGCCC CTATGAGGCA CTATCCTGCG CGGGCGGTAT CTACATCACC GCCGAGACAC CGAACCCAGA GCAGACGGTG TCCGATCTGG CTTGGAAGAA CCATCAGATG CCTGCCTATC ACCTGATCCC CCGTCAGGGT AAAGGGATTA CGATGGTCAA CATTGGCGTC GGACCATCCA ACGCGAAAAC CATCTGCGAT CACCTTGCGG TGATGCGTCC GCATGCCTGG CTGATGATTG GCCACTGCGG CGGCCTGCGC GAGAGTCAGT CCATTGGTGA TTATGTGCTG GCACACGCTT ACCTGCGTGA CGATCACGTA CTGGACGCCG TATTGCCGCC TGACATCCCG ATTCCCAGCA TCGCCGAAGT GCAGCGTGCG TTGTACGACG CCACTAAGAT GGTCAGCGGC ATGCCGGGAG AAGAAGTTAA GCAGCGCCTG CGTACCGGCA CGGTGGTTAC CACCGATGAC CGCAACTGGG AGCTCCGCTA TGCGGCCTCT GCTCTACGGT TTAATCTCAG TCGCGCCGTC GCGGTAGATA TGGAAAGTGC GACAATTGCC GCGCAGGGGT ATCGTTTCCG AGTGCCTTAC GGCACGCTGC TGTGCGTCTC GGATAAGCCA TTACACGGTG AAATCAAGCT GCCGGGACAG GCAAACCGTT TCTATGAAGG GGCGATTTCG GAGCATTTGC AGATTGGCAT CTGCGCCATC GATCTGTTGC GGGCTGAAAG CGATAAGCTG CACTCACGCA AACTGCGTAC CTTTAACGAA CCGCCGTTCC GCTAG
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Protein sequence | MHNSDVSLTV TQALDKLEAL YDDAVSALRD AIGDFINDGT LPDANARAAG LFSYPALRVS WSGNSTGHPR HRAYGRFTHP GSYSTTVTRP AFLRAYLAEQ LALLEGDYDV TIDVSPSQQE IPFPYVLDGS DLILDRSMSA GIAKHFPTTE LSQIGDETAD GLFHATTTSP LSHFDALRTD FSLARLRHYT GTPVEHIQPF ILFTNYTRYV DEFVRWACAQ IADPDSPYEA LSCAGGIYIT AETPNPEQTV SDLAWKNHQM PAYHLIPRQG KGITMVNIGV GPSNAKTICD HLAVMRPHAW LMIGHCGGLR ESQSIGDYVL AHAYLRDDHV LDAVLPPDIP IPSIAEVQRA LYDATKMVSG MPGEEVKQRL RTGTVVTTDD RNWELRYAAS ALRFNLSRAV AVDMESATIA AQGYRFRVPY GTLLCVSDKP LHGEIKLPGQ ANRFYEGAIS EHLQIGICAI DLLRAESDKL HSRKLRTFNE PPFR
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