Gene PC1_1421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1421 
Symbol 
ID8132360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp1664181 
End bp1665500 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content54% 
IMG OID644864711 
Producthypothetical protein 
Protein accessionYP_003017003 
Protein GI253687813 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.000104624 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAAAA CGAGAATCGC GGCGACTCTG GGGCTGCTGA TGGGGGTGGG GAGTGCGAGC 
GTTCAGGCGC ACGACCATGA GGTATTGCGC GGACGATTAA TCTTTTCCGA TCACCAGAAA 
CCGACGCTCA GCGTGCTGGA TCTGGATACC TTCAAAGTCA CACATACTTT TGACGTGGGT 
CACGCGAACG CATCGCTGGT GCCTACCGAA GATGGCCGAT TCACCATCGT CAATCTTTAC 
GATGACGCGG GTACGATTGC TTTCCTCGAT ACTGGCCTGA CCTATGAATC GCATGACGAC 
CATCTGGACG TGCATAAAGG TGAGCCGCGG CTTTTGCCGC TGCGGGTGAC GGGAGACAAA 
CCCTCGCATA TTACCTCGGA AAACGGCTGG ATCGCCTGGT CATACGATGG CTTACGTCCG 
TGGGACGGCC CCAGCCAGCC TGAATCGGTG ATGATCCGTT TGTCTGAACT GGATAGCGCC 
AATCCTGTCG TTGAGAAACG TAAAAGCCCT GCGCCGCAGC ACGGTATCAC TGCGCCGTTG 
GGGAACAACC GGTGGCTAAT TTCCGTGCCG AAAGCGGCCT ATGCCAAAGG TGATGATAAA 
ACGGTGACGT CGCGGCCTAA TGGCTTTGTT GTTTATCAGC AGGATAAGGG CTGGAAAGCC 
ATTGCGGACT TTAATCAGGC ACAGGATCCC CAGCGTTCGT GTAAAGAATT TCACGGCCAC 
AGCGCGCTGA ATCATGTTCA CGTTTTTGGC TGTAATGCAA AACTGGCGGA TGGTGATGCA 
AAAAGTGACG GCGGCGTGTT GATCGTAAAA CAGCAGAGTG GGAAATGGGT GTCGCACAAG 
CTGGCTTATC CTGACGATCG TCGTACCAGT ACGCTGAAAT CGGGTCTGCA AGGTCGTTAC 
GTCATTGGGA ATTACGGTGG GCTGGGTGGG CAGCCATTTA ACGCACTGAT TCGTATCGAT 
CCGCAATCCA AAAAGCTTAC GGCACAGGAT GTGTTTTCCA TCCCGGATGA ACAGGCTGTG 
TGTAAATTTG AAATCTCTGC CGATGGCAAG CGAGTGGCAA ACCTGACACC AGATGGCAAG 
CTGCGTCTAT ATGATGTGGC ACCAAACTGG AAGCAAATAG CCAGCTTTGA TGCGGTCGAG 
GCGTTTGACT GCGCTTACGG TGCCAAAACG CCGACACCGT CGCTCGCCAT CGTCGGCGGC 
AGCGTGTACG TCAGCGATCC GGTGAATCAG CGCATTCGTG AGTTTTATCT GAACAGCGCG 
AAGCAGGGGC TGGATATTAA GATTGATGGC GCGCCTACCG AGCTGGCGGG TAAGCGCTAA
 
Protein sequence
MQKTRIAATL GLLMGVGSAS VQAHDHEVLR GRLIFSDHQK PTLSVLDLDT FKVTHTFDVG 
HANASLVPTE DGRFTIVNLY DDAGTIAFLD TGLTYESHDD HLDVHKGEPR LLPLRVTGDK 
PSHITSENGW IAWSYDGLRP WDGPSQPESV MIRLSELDSA NPVVEKRKSP APQHGITAPL 
GNNRWLISVP KAAYAKGDDK TVTSRPNGFV VYQQDKGWKA IADFNQAQDP QRSCKEFHGH 
SALNHVHVFG CNAKLADGDA KSDGGVLIVK QQSGKWVSHK LAYPDDRRTS TLKSGLQGRY 
VIGNYGGLGG QPFNALIRID PQSKKLTAQD VFSIPDEQAV CKFEISADGK RVANLTPDGK 
LRLYDVAPNW KQIASFDAVE AFDCAYGAKT PTPSLAIVGG SVYVSDPVNQ RIREFYLNSA 
KQGLDIKIDG APTELAGKR