Gene PC1_1411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1411 
Symbol 
ID8132350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1649396 
End bp1652074 
Gene Length2679 bp 
Protein Length892 aa 
Translation table11 
GC content56% 
IMG OID644864701 
ProductTonB-dependent heme/hemoglobin receptor family protein 
Protein accessionYP_003016993 
Protein GI253687803 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID[TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAA GAACACAACA GCAAAACAGC CGATTGTTAC AACTTAATCC ACTTTCTCTT 
GCCGTCGGCA TCGCACTGTC GCTGCCTGCT TCATTCCACT ATGCGCAAGC AGAAACACCG
GCAGCCAACG TTCAGGAGGC GGCTCGCCAT AGCGTCACCT TCTCCATCAG CCCGCAGCCG
TTAAGCAGCG CGCTGCTGCG TTTCGCTGAA CAGGCGGGGT TACAGGTCTT TTTTGCCGAC
GTCAAACTGG AAAATATGCA GGCCACTTCC CTCCAGGGGC GTTTCACGCC AGAGCAGGGG
CTACGCAGGA TGATCGGCAC TAACCCAGTC GATTTCCAGA TCGGTAGCAA CGGCGTCATT
ACCTTGCGCC CTCGTTCAAC CAACGTCGAT ACGGCCAAAA TAGACGATGT GATGACGGTA
CGTGCCTTTA CCGTCGCCAA TCCCGGTGAC TGGATCTACG AACAGCCCCG TGCCATCAGC
GTTATTTCAC GCGAGCAGAT GGATAACCGC CCTTCCCGCC ATGCCGCCGA TCTGCTGGAA
CAATCCGCTG GCGTTTACTC CAGCGTCAGC CAGCAGGATC CTTCGCTGTC GGTGAACATT
CGCGGCATAC AGGATTTCGG CCGCGTGAAT ATGAACATCG ACGGCGTGCG GCAGAATTTT
CAAAAAACCG GCTACGGGCA GCGTAACGGT CAGATGTATA TCGATTCGGA GCTGCTCTCC
GGCGCAACCA TTGAAAAAGG CGCGACAAAC GTGATGGGCA GCGCAGGTAC GCTGGGCGGT
GTCGCCACGT TTAACACCGT TAGCGCCCAC GATTTTCTGG CGCCGGGTAA AGAACTGGGC
GGAAAATTGC ACGCCAGCAC AGGCGACAAC GGCACGCATT TTATCGGCAG CGGCGTGCTC
GCACTGGGTA ACGAAAGCGG CGACATTCTG GTCGGTGCCA GCGAGCGTCA TCTGGGCGAC
TACTGGCCGG GGAATGATGG CAACCTCGGT AATATTCGTA TTCCCGGAAA TTCAACTAAT
TACGAAGAGT GGGCGAATAA CTTAAAGCAT CAGAAAGTGA CCAGCGCGGC CTACACCATG
CGCTCACGGC TGGCGAAAGT CGGCTGGAAT CTGCCTGCCA ATCAGCGCTT CCAGCTCAGC
TATATGCAAA CGCAAACCTC TTCTGAAAAC GCAGGGACGT TATCCAATCT TTCCAATACC
GAACTGGGTT GGAAAGCCAG CGGACACAGC GAGATTATGG CACGCAGTAC CGCGCTGGAT
TACAGCCTGA AGCCGGACGA TCAGCGCTGG CTGGATTTTA AGGCCAAGAT TTATTACGCC
GATACCAATA ACGACACCGA TAACTATGCG CTCTCTAATA CCAGTGCCTA TCATGAAAGC
ACGCGGCTAC GCACGTACGG CGCCCAAGCG CAGAATACCT CGACGCTGTG GCAGCAGGGC
GCGCACGATC TGAAAACTGA CTACGGGCTG GATTTCTATT ACGACAAGAT CACGACGGAC
AGCACCAATA GCACGGCCAG TAACGCCACC CCGGAAGGGA ACCGCGCGAT GGCCAGCCTG
TTCGCGAACC TGAATTACGC CTACGACGAA TGGGTAACGC TGCAAGGCGG CCTGCGTTAC
GATCGCTACC GATTACGCGG CACCACCAGC ATCAGCTATC GGGAAATTCC CTATACCATC
ACGAATCCCT GCACCGCACG GTCGATCGCG CTCTGCCCAC CGTTCGTGAC CACCACGCAG
GATTGGAATG TCGATGACGA ACACGGCAAA CTTTCCCCCA CCCTGTTTGC TGGCGTCCGC
CCCGGCGTTG AATGGCTACA GCTGTTCACC AGCTATGGCC TGTCCTGGCG TCCGCCGTCA
GTCAGCGAAA CCTTTGCCAA CGGCACCTAC AGCGCAGGCA ACTATTACCT CTATCCAAAC
CCCAACCTTA AGCCGGAACG CTCTCGCGCC TGGGAAGTCG GATTCAATAT TCAGCAGCCT
AATCTGCTCG TTGATGGCGA CAGGCTGGTC AGCAAAGTGT CCTATTTCGA CACCCGGATC
AACAACTACA TCAGCCTGAA CGGCGCGCGC AATAAGCCGG GCTATAACGG CTATTCCCTC
AGCAATTCCG TGTTCCAGAA CAATCTGGCG AAGAGTCGCT TCCGCGGCAT GGAATACCAG
CTGAATTACG ACGCGGGCTT TTTATATGTC GATGCCACCT ACACCCACAT GATCGGCAAT
AACGATTTCT GTGCGCCGGT GGCCTGGATG GGCGGCGTCA CGACCGTCGG CGGTTCCAGA
GGCAACTACT ACTCTACGCC TGTCGATACT ACGGCTAGCG ATTTCTCTTG CCAGAAAACG
CTGTTATTCA GCAACGCGGC CTATCTGCCG GGCGACCGCG GTTCCGTCAC GCTGGGGACA
CGCGTCTTCG ATCGCAAACT GGATATGGGC GTCACGATGC GCTTCGCTCC CGGCTATCAG
GACGCTGCCG CACCGGCCAA CTCCGCCTAT TTAGCCGACT GGCCCAAATA TGAAGTTTAC
GATCTGTACG CCAGCTATCG TCTGACCGAC AGCCTGACGG TACGCGGTTC CGTCGAAAAT
ATCGCTAACC GTACTTACAT CGTGAGCTAT GGCGAATCAT TGGGTTACAC ACCAAGCCGG
GGCAGAACGG TGCAGGCTGG CGTGGAGTAC CGATTCTAA
 
Protein sequence
MFKRTQQQNS RLLQLNPLSL AVGIALSLPA SFHYAQAETP AANVQEAARH SVTFSISPQP 
LSSALLRFAE QAGLQVFFAD VKLENMQATS LQGRFTPEQG LRRMIGTNPV DFQIGSNGVI
TLRPRSTNVD TAKIDDVMTV RAFTVANPGD WIYEQPRAIS VISREQMDNR PSRHAADLLE
QSAGVYSSVS QQDPSLSVNI RGIQDFGRVN MNIDGVRQNF QKTGYGQRNG QMYIDSELLS
GATIEKGATN VMGSAGTLGG VATFNTVSAH DFLAPGKELG GKLHASTGDN GTHFIGSGVL
ALGNESGDIL VGASERHLGD YWPGNDGNLG NIRIPGNSTN YEEWANNLKH QKVTSAAYTM
RSRLAKVGWN LPANQRFQLS YMQTQTSSEN AGTLSNLSNT ELGWKASGHS EIMARSTALD
YSLKPDDQRW LDFKAKIYYA DTNNDTDNYA LSNTSAYHES TRLRTYGAQA QNTSTLWQQG
AHDLKTDYGL DFYYDKITTD STNSTASNAT PEGNRAMASL FANLNYAYDE WVTLQGGLRY
DRYRLRGTTS ISYREIPYTI TNPCTARSIA LCPPFVTTTQ DWNVDDEHGK LSPTLFAGVR
PGVEWLQLFT SYGLSWRPPS VSETFANGTY SAGNYYLYPN PNLKPERSRA WEVGFNIQQP
NLLVDGDRLV SKVSYFDTRI NNYISLNGAR NKPGYNGYSL SNSVFQNNLA KSRFRGMEYQ
LNYDAGFLYV DATYTHMIGN NDFCAPVAWM GGVTTVGGSR GNYYSTPVDT TASDFSCQKT
LLFSNAAYLP GDRGSVTLGT RVFDRKLDMG VTMRFAPGYQ DAAAPANSAY LADWPKYEVY
DLYASYRLTD SLTVRGSVEN IANRTYIVSY GESLGYTPSR GRTVQAGVEY RF