| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1404 |
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| Symbol | |
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| ID | 8132343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1639805 |
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| End bp | 1640818 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644864694 |
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| Product | D-cysteine desulfhydrase |
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| Protein accession | YP_003016986 |
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| Protein GI | 253687796 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2515] 1-aminocyclopropane-1-carboxylate deaminase |
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| TIGRFAM ID | [TIGR01275] pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCTTG CCCGATTCCC CCGTTTGTCA CTGGGCCATT TTCCTACACC GCTGGAGGTA
TTGCCGAATC TGTCTGCCTA TCTGGGCGGG CCGACGATTT ATATCAAACG CGACGATGCG
ACAGGACTGG CAACGGGTGG GAATAAAACC CGCAAACTGG AATTCCTGTT AGCCGATGCG
CAACAGCAGG GCGCGGATAT CATTATCACG CAGGGCGCGA CGCAGTCTAA CCATGTACGG
CAAACCATTG CGGCGGCGAC AAAGCTGGGG CTGAAAACCA AAGTACTGCT GGAAAAGCGC
GTGGAGGACT ACGGCGAAGA CTACCAGCGT TCCGGCAACG TGCTGCTGGA TCATCTGCTT
GGCGGTGAAA TTATCGATCA TCTGCCCGCT GGAACGGACA TGCAGCAGGC GATGGAAACG
CTGGCAGAAT CGCTGCGCAA AGAAGGATTG AAACCTTATG TCATTCCCGG CGGCGGCTCC
AGTCCGGTAG GCGCACTAGG CTATGTCGCC TGTGCGGAAG AGTTGCTGTT TCAGTCTAGC
CAGCAGCGCC TGCGCATCGA TCATATTGTG CATGCGACGG GGAGCACGGG TACGCAGGCG
GGATTGGTTA CCGGGCTGGC GGCGACGCAT AGCCAAATTC CCTTGTTAGG CATCAGCGTC
AGAGCGCCGA AAGCGAAGCA GGAAGAGAAT GTTTACGCAT TAGCGCAGCG CACCTGGCAA
CTGCTCGGTA TTCCGGGTGA GCTGCCGCGC AGTGCTGTGC AGGTGAACAG TGACTACGTT
GGCAAAGGGT ACGGTATTCC AACCGAAGGA ACGCTGGAAG CACTCAGGCT GCTGGCACAA
CTGGAAGGGA TTCTGCTCGA TCCGGTCTAT TCCGGTAAAG GCATGGCGGG GCTGATCGAC
CTGATTCGTC AGGGACATTT TCACGCCGAT GAAAACATTG TCTTCATCCA TACTGGTGGG
TCAGCCGGAC TGTTTGGTTA CCGTCAACTG TTTGAACAGA CGGCCGCACA ATGA
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| Protein sequence | MHLARFPRLS LGHFPTPLEV LPNLSAYLGG PTIYIKRDDA TGLATGGNKT RKLEFLLADA
QQQGADIIIT QGATQSNHVR QTIAAATKLG LKTKVLLEKR VEDYGEDYQR SGNVLLDHLL
GGEIIDHLPA GTDMQQAMET LAESLRKEGL KPYVIPGGGS SPVGALGYVA CAEELLFQSS
QQRLRIDHIV HATGSTGTQA GLVTGLAATH SQIPLLGISV RAPKAKQEEN VYALAQRTWQ
LLGIPGELPR SAVQVNSDYV GKGYGIPTEG TLEALRLLAQ LEGILLDPVY SGKGMAGLID
LIRQGHFHAD ENIVFIHTGG SAGLFGYRQL FEQTAAQ
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