| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1399 |
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| Symbol | |
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| ID | 8132338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1634760 |
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| End bp | 1635785 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644864689 |
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| Product | ABC transporter periplasmic binding protein |
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| Protein accession | YP_003016981 |
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| Protein GI | 253687791 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.117419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAATC ACTCACTCCC CGCGAAAAAA TCGACACGTT TCACACGCCT TGCTGCCCTG
ATCGGCCTGA CGCTAACGGC CTTTGGCGCC AGTGCGGAAG GCAGCATCAG CATTGCGCAG
CAGTTTGGCA TTGGCTACCT GATTCTGGAT GTGGTGCGCG ACCAAAACCT GATAGAGAAG
CACGGTAAGC AGCAGGGCCT GGATATCAAG GTAGACTGGC GCACACTTTC TGGTGCGACG
GCGATTAACG AAGCACTGCT ATCCGGCGCG CTGGATGTGG CCTCCGCCGG GGTTCCTCCA
ATGCTGACCG TATGGGATCG CACACAGGGT CGTCAGAATG TGAAAGCAAT CGCCTCACTC
GGTTCGATGC CCAACTATTT ACTTAGCAAT AACCCAGCAG TGAAATCTAT CCGCGATCTG
AGCGATAAAG ACCGTATCGC CGTGCCTGCG GCAGGTGTAG GTTTCCAGTC TCGCACGCTG
CAAATCGAAA CCGCGAAGCT CTATGGCGCG GAAGATTTCA AACGTTTCGA TAAGATTTCT
GTCAGCCTGC CGCATCCCGA TGCCAGCGCG GCGCTGATCG CGGGGGGTTC CGAAATCAAT
GCACACTTTT CCAGCCCACC GTTCCAATAT CAGGCGCTGG AACATGCCAA TGTGCACAAG
ATCCTAAGCT CTTATGACGT ACTGGGCGGT CAGGCAACGT TCAACGTGCT CTACACCACG
CAGAAATTCC ATGATGAAAA CCCGAAAACC TACCGCGCCT TCTATGAGGC GCTGAAAGAA
GCGTCCCAGA TTATCAAAGC AGATAAAGTC GCGGCGGCAG AAACCTATAT TCGGGTAGAA
AAATCGAAGC TGGATCCTGA ACTGGTCAAA CGTATCGTCG CCGATCCCGA AATCGATTTC
ACTATCACGC CAGAACGCAC CTACGTTTAT GCCGAAAAGT TGCAACAGCT TGGCGTGCTG
AAAAACAAAG CCGCCTCCTG GAAGGACTAT TTCTTTGCTG AAATCCACGA CCAACCAGGT
AGCTAA
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| Protein sequence | MMNHSLPAKK STRFTRLAAL IGLTLTAFGA SAEGSISIAQ QFGIGYLILD VVRDQNLIEK
HGKQQGLDIK VDWRTLSGAT AINEALLSGA LDVASAGVPP MLTVWDRTQG RQNVKAIASL
GSMPNYLLSN NPAVKSIRDL SDKDRIAVPA AGVGFQSRTL QIETAKLYGA EDFKRFDKIS
VSLPHPDASA ALIAGGSEIN AHFSSPPFQY QALEHANVHK ILSSYDVLGG QATFNVLYTT
QKFHDENPKT YRAFYEALKE ASQIIKADKV AAAETYIRVE KSKLDPELVK RIVADPEIDF
TITPERTYVY AEKLQQLGVL KNKAASWKDY FFAEIHDQPG S
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